RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	MT-CYB	P00156	380 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	FGF1	P05230	155 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	RPLP0	P05388	317 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	AK4	P27144	223 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	ADCY8	P40145	1251 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	ABCG1	P45844	678 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	MARCKSL1	P49006	195 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	COPS2	P61201	443 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	CTBS	Q01459	385 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	ADCY2	Q08462	1091 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	PPP2R5E	Q16537	467 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	C3orf38	Q5JPI3	329 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	HENMT1	Q5T8I9	393 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	SLC30A9	Q6PML9	568 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	LYSMD3	Q7Z3D4	306 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	TRIM74	Q86UV6	250 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	CCNJL	Q8IV13	435 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937		Q8N9G6	341 aa	Predicted RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZDHHC1	Q8WTX9	485 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	PTCD2	Q8WV60	388 aa	Known RBP	13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	KRT35	Q92764	455 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	COX14	Q96I36	57 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	OR2M4	Q96R27	311 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	TRIB3	Q96RU7	358 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	WDR24	Q96S15	920 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	VAT1	Q99536	393 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	LRRN3	Q9H3W5	708 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	TAAR2	Q9P1P5	351 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	SATB2	Q9UPW6	733 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	RNF215	Q9Y6U7	377 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	DUSP10	Q9Y6W6	482 aa		13.72	□□□□□ -0.21
HDAC7-222	ENST00000477937	PKD1L2	Q7Z442	2459 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	SCN8A	Q9UQD0	1980 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937		A0A1W2PQM1	296 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	RCCD1	A6NED2	376 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	BTNL10	A8MVZ5	291 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	HACD1	B0YJ81	288 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	TMX2-CTNND1	H3BSU7	103 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZW10	O43264	779 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	PMPCB	O75439	489 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	NDST3	O95803	873 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	PIRT	P0C851	137 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	RBMS1	P29558	406 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	CTNNA1	P35221	906 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	TNNT3	P45378	269 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	ERVPABLB-1	P60509	514 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	WASHC5	Q12768	1159 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	PYCR3	Q53H96	274 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	RAD9B	Q6WBX8	426 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	BBS12	Q6ZW61	710 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	MARK2	Q7KZI7	788 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	PID1	Q7Z2X4	250 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	SFTPA2	Q8IWL1	248 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	WDR36	Q8NI36	951 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	HAUS1	Q96CS2	278 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	SLC46A1	Q96NT5	459 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	SRPK1	Q96SB4	655 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	BAG1	Q99933	345 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	HEMGN	Q9BXL5	484 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	GPR63	Q9BZJ6	419 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	STRADB	Q9C0K7	418 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	THSD1	Q9NS62	852 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	RAD18	Q9NS91	495 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	UBP1	Q9NZI7	540 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	VPS18	Q9P253	973 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	FAM153A	Q9UHL3	310 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	ZNHIT2	Q9UHR6	403 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	SHOC2	Q9UQ13	582 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	EFR3B	Q9Y2G0	817 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	PCDHA3	Q9Y5H8	950 aa		13.71	□□□□□ -0.21
HDAC7-222	ENST00000477937	DSP	P15924	2871 aa	Known RBP	13.71	□□□□□ -0.22
HDAC7-222	ENST00000477937	CCDC187	A0A096LP49	1063 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	CCDC66	A2RUB6	948 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	RHPN2P1	A8MT19	583 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937		D6RAR5	112 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	APOC4-APOC2	K7ER74	178 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	ECEL1	O95672	775 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	APOC2	P02655	101 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	ATP1A1	P05023	1023 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	CD68	P34810	354 aa	Predicted RBP	13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	CETN2	P41208	172 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	ACTR1B	P42025	376 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	VAV2	P52735	878 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	MAZ	P56270	477 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	PCBP4	P57723	403 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	ACTR1A	P61163	376 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	CCDC173	Q0VFZ6	552 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	XRCC4	Q13426	336 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	BIRC2	Q13490	618 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	LRP8	Q14114	963 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	CCDC181	Q5TID7	509 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	FOXR1	Q6PIV2	292 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	IGF2-AS	Q6U949	168 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	TMC3	Q7Z5M5	1100 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	SPRED1	Q7Z699	444 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	KIAA1328	Q86T90	577 aa		13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	C17orf82	Q86X59	251 aa	Predicted RBP	13.7	□□□□□ -0.22
HDAC7-222	ENST00000477937	GALNT13	Q8IUC8	556 aa		13.7	□□□□□ -0.22

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