RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 C14orf28Q4W4Y0 310 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 CERCAMQ5T4B2 595 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 IGF2-ASQ6U949 168 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 CCDC50Q8IVM0 306 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 CCDC74AQ96AQ1 378 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 SRPK1Q96SB4 655 aaKnown RBP21.63■■□□□ 1.05
COL9A3-211ENST00000477612 CDH19Q9H159 772 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 FAM83DQ9H4H8 585 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 ZFYVE1Q9HBF4 777 aa21.63■■□□□ 1.05
COL9A3-211ENST00000477612 SPATS2LQ9NUQ6 558 aaKnown RBP21.63■■□□□ 1.05
COL9A3-211ENST00000477612 LOC285095A0A1B0GVY8 99 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 TLX3O43711 291 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-211ENST00000477612 BRINP1O60477 761 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 USP12O75317 370 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 NDST3O95803 873 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 EPOP01588 193 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 FGF1P05230 155 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 ADCY8P40145 1251 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 GNPDA1P46926 289 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 LSSP48449 732 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 ILF3Q12906 894 aaKnown RBP eCLIP21.62■■□□□ 1.05
COL9A3-211ENST00000477612 LYSMD3Q7Z3D4 306 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 ZC3H18Q86VM9 953 aaKnown RBP21.62■■□□□ 1.05
COL9A3-211ENST00000477612 LSMEM2Q8N112 164 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 SNIP1Q8TAD8 396 aaKnown RBP21.62■■□□□ 1.05
COL9A3-211ENST00000477612 HTR3CQ8WXA8 447 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 QKIQ96PU8 341 aaKnown RBP eCLIP21.62■■□□□ 1.05
COL9A3-211ENST00000477612 FCRL5Q96RD9 977 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 DPEP2Q9H4A9 486 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 VPS18Q9P253 973 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 FAM153AQ9UHL3 310 aa21.62■■□□□ 1.05
COL9A3-211ENST00000477612 CASC3O15234 703 aaKnown RBP21.61■■□□□ 1.05
COL9A3-211ENST00000477612 NUDT21O43809 227 aaKnown RBP21.61■■□□□ 1.05
COL9A3-211ENST00000477612 PDX1P52945 283 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 DCDC1P59894 354 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 CTBSQ01459 385 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 PEX6Q13608 980 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 NOMO1Q15155 1222 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 PYCR3Q53H96 274 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 KDELC1Q6UW63 502 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 ZNF567Q8N184 647 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 HERPUD2Q9BSE4 406 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 HEMGNQ9BXL5 484 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 POLR1BQ9H9Y6 1135 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 TAAR2Q9P1P5 351 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 TMEM98Q9Y2Y6 226 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 FAM208BQ5VWN6 2430 aa21.61■■□□□ 1.05
COL9A3-211ENST00000477612 A0A1W2PQM1 296 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 GRID2IPA4D2P6 1211 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 FADS2P1A8MWK0 482 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 NFKB1P19838 968 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 AK4P27144 223 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-211ENST00000477612 EIF2S3P41091 472 aaKnown RBP21.6■■□□□ 1.05
COL9A3-211ENST00000477612 NAP1L1P55209 391 aaKnown RBP21.6■■□□□ 1.05
COL9A3-211ENST00000477612 RWDD2BP57060 319 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 SPIDRQ14159 915 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 PCSK7Q16549 785 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 TBC1D25Q3MII6 688 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 PID1Q7Z2X4 250 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 KDELC2Q7Z4H8 507 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 SFTPA2Q8IWL1 248 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 FGF11Q92914 225 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 OR2M4Q96R27 311 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 OSBPL8Q9BZF1 889 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 LRRN3Q9H3W5 708 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 RAD18Q9NS91 495 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 TRHDEQ9UKU6 1024 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 ZNF711Q9Y462 761 aa21.6■■□□□ 1.05
COL9A3-211ENST00000477612 DNAJC6O75061 913 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 PMPCBO75439 489 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 ACTN2P35609 894 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 CCL7P80098 99 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 LRP8Q14114 963 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 NR1D2Q14995 579 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 PDPK2PQ6A1A2 396 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 CCDC70Q6NSX1 233 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 ZNF438Q7Z4V0 828 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 KIAA1328Q86T90 577 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 TRIM74Q86UV6 250 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 TXLNBQ8N3L3 684 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 GPR26Q8NDV2 337 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 NBEAQ8NFP9 2946 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 ZDHHC1Q8WTX9 485 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 HAUS1Q96CS2 278 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 MRGPRX2Q96LB1 330 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 ZNF578Q96N58 590 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-211ENST00000477612 RMI1Q9H9A7 625 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 KLHL8Q9P2G9 620 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-211ENST00000477612 LRIT1Q9P2V4 623 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 SHOC2Q9UQ13 582 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 PCDHGA8Q9Y5G5 932 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 OAS3Q9Y6K5 1087 aaKnown RBP21.59■■□□□ 1.05
COL9A3-211ENST00000477612 RNF215Q9Y6U7 377 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 ITPR1Q14643 2758 aa21.59■■□□□ 1.05
COL9A3-211ENST00000477612 A0A1W2PNU3 283 aaPredicted RBP21.58■■□□□ 1.05
COL9A3-211ENST00000477612 B4DGG1 531 aa21.58■■□□□ 1.05
COL9A3-211ENST00000477612 INPP4BO15327 924 aa21.58■■□□□ 1.05
COL9A3-211ENST00000477612 MPOP05164 745 aa21.58■■□□□ 1.05
COL9A3-211ENST00000477612 WNT3AP56704 352 aa21.58■■□□□ 1.05
COL9A3-211ENST00000477612 GABREP78334 506 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms