RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 M0QZ24 198 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SCAMP1O15126 338 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SPINT2O43291 252 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 JRKO75564 520 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 RB1P06400 928 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 LINC00271P0C7V0 271 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TGFB3P10600 412 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 DAOP14920 347 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 UBA1P22314 1058 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 MCM3P25205 808 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 UBA7P41226 1012 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 GARSP41250 739 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 PRCPP42785 496 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 EIF5P55010 431 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 CDH8P55286 799 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TAS2R38P59533 333 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TAS2R40P59535 323 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 PRAMEP78395 509 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TFAP4Q01664 338 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF155Q12901 538 aaPredicted RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 MAD2L1Q13257 205 aaPredicted RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 PNLIPRP3Q17RR3 467 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 ASTE1Q2TB18 679 aaPredicted RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 DCST1Q5T197 706 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 LRIF1Q5T3J3 769 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 FRG2Q64ET8 278 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 FAM122CQ6P4D5 195 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.881e-13■■■■■ 35.6
TARDBP-208ENST00000477447 CHST9Q7L1S5 443 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 C16orf82Q7Z2V1 217 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SDCCAG8Q86SQ7 713 aaPredicted RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 RBM23Q86U06 439 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 CHERPQ8IWX8 916 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TEX11Q8IYF3 940 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 BEST3Q8N1M1 668 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SRBD1Q8N5C6 995 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SMRP1Q8NCR6 262 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 APBB2Q92870 758 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TMEM19Q96HH6 336 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 MTERF1Q99551 399 aaKnown RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 TREX2Q9BQ50 279 aaPredicted RBP3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SYNCQ9H7C4 482 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 LTB4R2Q9NPC1 389 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 SETD4Q9NVD3 440 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 HAUS2Q9NVX0 235 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 MCM9Q9NXL9 1143 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 COPG2Q9UBF2 871 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 STK39Q9UEW8 545 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 OR14J1Q9UGF5 321 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 FBXW11Q9UKB1 542 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 VDAC3Q9Y277 283 aa3.31□□□□□ -1.88
TARDBP-208ENST00000477447 ANKRD18BA2A2Z9 1011 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 GOLGA6L9A6NEM1 432 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 HS3ST1O14792 307 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 CLGNO14967 610 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 VILLO15195 856 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 MID1O15344 667 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 KCNK5O95279 499 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 PPP1R3DO95685 299 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 SRPRAP08240 638 aaKnown RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 FGF3P11487 239 aaPredicted RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 TMEM11P17152 192 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 GABRB1P18505 474 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 TMPOP42166 694 aaKnown RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 CASP2P42575 452 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 BRWD1-AS2P59051 145 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 MC1RQ01726 317 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 LRMPQ12912 555 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 CDC16Q13042 620 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 KIF19Q2TAC6 998 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF805Q5CZA5 627 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 FAM205BPQ63HN1 556 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 KIAA0930Q6ICG6 404 aaPredicted RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 MZT2BQ6NZ67 158 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 PRSS57Q6UWY2 283 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 ARMC9Q7Z3E5 817 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 TICAM1Q8IUC6 712 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 ODF3L1Q8IXM7 274 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 RNF168Q8IYW5 571 aaPredicted RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 OR1J2Q8NGS2 313 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 OR8K5Q8NH50 307 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 DUSP19Q8WTR2 217 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 RHBDF1Q96CC6 855 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 BICD1Q96G01 975 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 PCYT2Q99447 389 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 SEPT5Q99719 369 aaPredicted RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 PLK3Q9H4B4 646 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 SMARCAD1Q9H4L7 1026 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 GAREM1Q9H706 876 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 TBC1D29Q9UFV1 150 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 PADI3Q9ULW8 664 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 AMDHD2Q9Y303 409 aa3.3□□□□□ -1.88
TARDBP-208ENST00000477447 TRIP12Q14669 1992 aaPredicted RBP3.3□□□□□ -1.88
TARDBP-208ENST00000477447 SAA2-SAA4A0A096LPE2 208 aa3.29□□□□□ -1.88
TARDBP-208ENST00000477447 A0A0G2JPF8 293 aa3.29□□□□□ -1.88
TARDBP-208ENST00000477447 KANSL1LA0AUZ9 987 aa3.29□□□□□ -1.88
TARDBP-208ENST00000477447 A6NCN8 305 aa3.29□□□□□ -1.88
TARDBP-208ENST00000477447 HNRNPCL2B2RXH8 293 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms