RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 RUBCNLQ9H714 662 aa15.21■□□□□ 0.03
SMG5-204ENST00000476954 TBC1D29Q9UFV1 150 aa15.21■□□□□ 0.03
SMG5-204ENST00000476954 OSGIN2Q9Y236 505 aa15.21■□□□□ 0.03
SMG5-204ENST00000476954 PRKAB1Q9Y478 270 aa15.21■□□□□ 0.03
SMG5-204ENST00000476954 J3KR12 359 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 F13A1P00488 732 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 C9P02748 559 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 TYRP1P17643 537 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 SERPINA4P29622 427 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 EPHA4P54764 986 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 PNOCQ13519 176 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 IL11RAQ14626 422 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 GRM3Q14832 879 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 CDO1Q16878 200 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 RAET1GQ6H3X3 334 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 RFLNAQ6ZTI6 216 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 SYVN1Q86TM6 617 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 ZDHHC17Q8IUH5 632 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 PLXDC1Q8IUK5 500 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 MMP21Q8N119 569 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 CCDC185Q8N715 623 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 PAF1Q8N7H5 531 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 ADAMTS17Q8TE56 1095 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 TGM7Q96PF1 710 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 TUBGCP5Q96RT8 1024 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 PDFQ9HBH1 243 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 UBA2Q9UBT2 640 aaPredicted RBP15.2■□□□□ 0.02
SMG5-204ENST00000476954 TMEM59LQ9UK28 342 aa15.2■□□□□ 0.02
SMG5-204ENST00000476954 COPG1Q9Y678 874 aaKnown RBP15.2■□□□□ 0.02
SMG5-204ENST00000476954 A0A0U1RQS6 177 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 HEATR9A2RTY3 570 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
SMG5-204ENST00000476954 ZSCAN22P10073 491 aaPredicted RBP15.19■□□□□ 0.02
SMG5-204ENST00000476954 PER3P56645 1201 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 SNX16P57768 344 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 LRRC63Q05C16 580 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 C15orf59Q2T9L4 293 aaPredicted RBP15.19■□□□□ 0.02
SMG5-204ENST00000476954 PWWP2BQ6NUJ5 590 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 IYDQ6PHW0 289 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 Q6ZVL8 140 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 PYROXD2Q8N2H3 581 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 TSEN2Q8NCE0 465 aaKnown RBP15.19■□□□□ 0.02
SMG5-204ENST00000476954 UBE2Q2Q8WVN8 375 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 DTD2Q96FN9 168 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 BARD1Q99728 777 aaKnown RBP15.19■□□□□ 0.02
SMG5-204ENST00000476954 CRACR2AQ9BSW2 395 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 GPR87Q9BY21 358 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 ATP13A3Q9H7F0 1226 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 GPR83Q9NYM4 423 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 AJAP1Q9UKB5 411 aaPredicted RBP15.19■□□□□ 0.02
SMG5-204ENST00000476954 FER1L5A0AVI2 2057 aa15.19■□□□□ 0.02
SMG5-204ENST00000476954 FAM237AA0A1B0GTK4 181 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 PPP1R3GB7ZBB8 358 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 TMEM63AO94886 807 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 SOD1P00441 154 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 MT-ND3P03897 115 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 ITGA3P26006 1051 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 KRT9P35527 623 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 KRTAP10-9P60411 292 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMG5-204ENST00000476954 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 ZNF658Q5TYW1 1059 aaPredicted RBP15.18■□□□□ 0.02
SMG5-204ENST00000476954 SPNS3Q6ZMD2 512 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 PPP1R3BQ86XI6 285 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 RTL3Q8N8U3 475 aaKnown RBP15.18■□□□□ 0.02
SMG5-204ENST00000476954 SEC14L1Q92503 715 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 C18orf8Q96DM3 657 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 SMAD5Q99717 465 aaKnown RBP15.18■□□□□ 0.02
SMG5-204ENST00000476954 RETREG1Q9H6L5 497 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 CNOT8Q9UFF9 292 aaKnown RBP15.18■□□□□ 0.02
SMG5-204ENST00000476954 CD84Q9UIB8 345 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 KCNK6Q9Y257 313 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 FARSAQ9Y285 508 aaKnown RBP15.18■□□□□ 0.02
SMG5-204ENST00000476954 SLC30A1Q9Y6M5 507 aa15.18■□□□□ 0.02
SMG5-204ENST00000476954 SSU72P8A0A1W2PR75 194 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 TTC24A2A3L6 582 aaPredicted RBP15.17■□□□□ 0.02
SMG5-204ENST00000476954 TRAFD1O14545 582 aaPredicted RBP15.17■□□□□ 0.02
SMG5-204ENST00000476954 SNX2O60749 519 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 RASSF9O75901 435 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 HEXIM1O94992 359 aaKnown RBP15.17■□□□□ 0.02
SMG5-204ENST00000476954 LHCGRP22888 699 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 GABRB2P47870 512 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 RPS15P62841 145 aaKnown RBP15.17■□□□□ 0.02
SMG5-204ENST00000476954 BCL2L1Q07817 233 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 PKP1Q13835 747 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 MIIPQ5JXC2 388 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 HPS6Q86YV9 775 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 GALNT13Q8IUC8 556 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 CBARPQ8N350 705 aaPredicted RBP15.17■□□□□ 0.02
SMG5-204ENST00000476954 ST6GALNAC3Q8NDV1 305 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 SHC3Q92529 594 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 SH3KBP1Q96B97 665 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 CEP63Q96MT8 703 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 STN1Q9H668 368 aaKnown RBP15.17■□□□□ 0.02
SMG5-204ENST00000476954 COPG2Q9UBF2 871 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 CPNE7Q9UBL6 633 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 CFAP45Q9UL16 551 aa15.17■□□□□ 0.02
SMG5-204ENST00000476954 B3GNT3Q9Y2A9 372 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms