RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 NRP2O60462 931 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 GJB3O75712 270 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 CAPNS1P04632 268 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 ZCCHC18P0CG32 403 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 SLC6A4P31645 630 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 CLCN2P51788 898 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 OXCT1P55809 520 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 ATP6V0D1P61421 351 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 SEMA3AQ14563 771 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 RNF220Q5VTB9 566 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 RPS27LQ71UM5 84 aaKnown RBP16.39■□□□□ 0.21
TMEM53-208ENST00000476724 PTGR2Q8N8N7 351 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-208ENST00000476724 KIAA1191Q96A73 305 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 ATOH8Q96SQ7 321 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 TSC22D3Q99576 134 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 DERL2Q9GZP9 239 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 MCOLN1Q9GZU1 580 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 NACA2Q9H009 215 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 CCDC68Q9H2F9 335 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 SPAG4Q9NPE6 437 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 RIMS3Q9UJD0 308 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 RAB26Q9ULW5 256 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 CCDC189A1A4V9 331 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 ILVBLA1L0T0 632 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 C2orf81A6NN90 581 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 BBIP1A8MTZ0 92 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 FBP2O00757 339 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 PFDN6O15212 129 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 AP1G1O43747 822 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 FGF18O76093 207 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 SPATA31D3P0C874 917 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 ZNF140P52738 457 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-208ENST00000476724 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-208ENST00000476724 FOLH1Q04609 750 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 FPGSQ05932 587 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 RAB33AQ14088 237 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 GRM2Q14416 872 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 PTPRCAPQ14761 206 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 PPP1R3AQ16821 1122 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 SPATA31D4Q6ZUB0 917 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 RYBPQ8N488 228 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-208ENST00000476724 OR7D4Q8NG98 312 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 PLD4Q96BZ4 506 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 ROPN1LQ96C74 230 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 DCUN1D1Q96GG9 259 aa16.39■□□□□ 0.21
TMEM53-208ENST00000476724 LCHNA4D1U4 455 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 TRIM24O15164 1050 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 TEX28O15482 410 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 KERAO60938 352 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 MTHFD2P13995 350 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CR2P20023 1033 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 HSPA13P48723 471 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SH3BP2P78314 561 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CLEC6AQ6EIG7 209 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CYHR1Q6ZMK1 362 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CHST9Q7L1S5 443 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 RNF148Q8N7C7 305 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PCYOX1LQ8NBM8 494 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 RMDN1Q96DB5 314 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 ZNF512Q96ME7 567 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 DDX50Q9BQ39 737 aaKnown RBP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SPON2Q9BUD6 331 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CROTQ9UKG9 612 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CNOT11Q9UKZ1 510 aaKnown RBP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 ZNF840PA6NDX5 716 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SYCE1LA8MT33 242 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 E7ENX8 843 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 H3BNC9 293 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 MRASO14807 208 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 AZIN1O14977 448 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 LILRB3O75022 631 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 VPS4BO75351 444 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 NDUFS3O75489 264 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 RHOBTB1O94844 696 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CDK14O94921 469 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PYGLP06737 847 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SYN1P17600 705 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CD9P21926 228 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 CA8P35219 290 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 RAD51Q06609 339 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PLD1Q13393 1074 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PPIGQ13427 754 aaKnown RBP eCLIP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PDK3Q15120 406 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 OR4D1Q15615 310 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 HECTD3Q5T447 861 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 GLT6D1Q7Z4J2 308 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SPATA24Q86W54 205 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 TICAM1Q8IUC6 712 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 MARVELD2Q8N4S9 558 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 FIBCD1Q8N539 461 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PCDH20Q8N6Y1 951 aaKnown RBP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SH3RF2Q8TEC5 729 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 MID1IP1Q9NPA3 183 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 SCUBE2Q9NQ36 999 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 MRPL17Q9NRX2 175 aaKnown RBP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 PRKAG2Q9UGJ0 569 aa16.38■□□□□ 0.21
TMEM53-208ENST00000476724 MTF2Q9Y483 593 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-208ENST00000476724 DNAJC15Q9Y5T4 150 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms