RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, human

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIKFYVE-208	ENST00000474721	MYLK4	Q86YV6	388 aa	Predicted RBP	3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	FOXRED2	Q8IWF2	684 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	STPG4	Q8N801	248 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	AFG1L	Q8WV93	481 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	SCRN2	Q96FV2	425 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	TWNK	Q96RR1	684 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	ATOH8	Q96SQ7	321 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	MTERF1	Q99551	399 aa	Known RBP	3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	LMAN2L	Q9H0V9	348 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	ALKBH4	Q9NXW9	302 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	LOXL2	Q9Y4K0	774 aa		3.09	□□□□□ -1.91
PIKFYVE-208	ENST00000474721	MAGI2	Q86UL8	1455 aa		3.09	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	DLC1	Q96QB1	1528 aa		3.09	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ABCA5	Q8WWZ7	1642 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	BRWD3	Q6RI45	1802 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PABPN1L	A6NDY0	278 aa	Known RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	IPO5	O00410	1097 aa	Known RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	NR5A2	O00482	541 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PEX12	O00623	359 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PRC1	O43663	620 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	TK1	P04183	234 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	SP100	P23497	879 aa	Predicted RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CORO1A	P31146	461 aa	Known RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ADD2	P35612	726 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	HNRNPH2	P55795	449 aa	Known RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ACTR2	P61160	394 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	LMO4	P61968	165 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CCDC96	Q2M329	555 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	LRRC8E	Q6NSJ5	796 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	C17orf99	Q6UX52	265 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	GPAT4	Q86UL3	456 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	FAM160B2	Q86V87	743 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ZCCHC9	Q8N567	271 aa	Known RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	GPATCH11	Q8N954	259 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	BEST2	Q8NFU1	509 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CEP70	Q8NHQ1	597 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	SH3GL2	Q99962	352 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PAGR1	Q9BTK6	254 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	STN1	Q9H668	368 aa	Known RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	KIF17	Q9P2E2	1029 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	OR2W1	Q9Y3N9	320 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	STON1	Q9Y6Q2	735 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	MED14	O60244	1454 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ATP10A	O60312	1499 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	NRK	Q7Z2Y5	1582 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	MYO3A	Q8NEV4	1616 aa		3.08	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	IGLV5-45	A0A087WSX0	123 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721		A0A0G2JLW4	131 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PSMD14	O00487	310 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	BCAT2	O15382	392 aa	Predicted RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	FAM155B	O75949	473 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	RXRA	P19793	462 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	BDKRB2	P30411	391 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	DDIT3	P35638	169 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CTCF	P49711	727 aa	Predicted RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CSRP3	P50461	194 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ISL1	P61371	349 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	TAF11	Q15544	211 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	SERTAD4-AS1	Q5TG53	156 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	TTI2	Q6NXR4	508 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ANKRD54	Q6NXT1	300 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	METTL2B	Q6P1Q9	378 aa	Known RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CPLX2	Q6PUV4	134 aa	Known RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	C15orf39	Q6ZRI6	1047 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	LINGO2	Q7L985	606 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	WDR20	Q8TBZ3	569 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	METTL2A	Q96IZ6	378 aa	Known RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	LINC00479	Q96M42	142 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CMKLR1	Q99788	373 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	EGFL8	Q99944	293 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CLSTN3	Q9BQT9	956 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	WDR13	Q9H1Z4	485 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PDZD7	Q9H5P4	517 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	TFB2M	Q9H5Q4	396 aa	Known RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ESRP2	Q9H6T0	727 aa	Known RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	NOD2	Q9HC29	1040 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	MKKS	Q9NPJ1	570 aa	Predicted RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	IL1RAPL1	Q9NZN1	696 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	GRHPR	Q9UBQ7	328 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	FBXO9	Q9UK97	447 aa	Predicted RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	DNAJC16	Q9Y2G8	782 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	DLGAP4	Q9Y2H0	992 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	NPHP4	O75161	1426 aa	Predicted RBP	3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	C9orf84	Q5VXU9	1444 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ARHGAP23	Q9P227	1491 aa		3.07	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ABHD14A-ACY1	A0A1B0GW23	586 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ATRN	O75882	1429 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	IGHV4-39	P01824	125 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	PRSS56	P0CW18	603 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	CLK1	P49759	484 aa	Known RBP	3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	MYOM1	P52179	1685 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	DSCR10	P59022	87 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	GNB1	P62873	340 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	ZNF234	Q14588	700 aa		3.06	□□□□□ -1.92
PIKFYVE-208	ENST00000474721	SPHKAP	Q2M3C7	1700 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms