RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CERS6Q6ZMG9 384 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 CYHR1Q6ZMK1 362 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 RIPOR1Q6ZS17 1223 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 NECAB2Q7Z6G3 386 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 ADGRG6Q86SQ4 1221 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 STK40Q8N2I9 435 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 MAB21L3Q8N8X9 362 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 KLHL23Q8NBE8 558 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 CD200R1Q8TD46 325 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 ISG20Q96AZ6 181 aaKnown RBP9.77□□□□□ -0.85
USP39-214ENST00000474572 EID2BQ96D98 161 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 GCNAQ96QF7 691 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 LYSMD1Q96S90 227 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 SLC46A2Q9BY10 475 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 CFAP97Q9P2B7 532 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 STX18Q9P2W9 335 aaKnown RBP9.77□□□□□ -0.85
USP39-214ENST00000474572 STOML1Q9UBI4 398 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 IKZF3Q9UKT9 509 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 INTS6Q9UL03 887 aaKnown RBP9.77□□□□□ -0.85
USP39-214ENST00000474572 TMCO1Q9UM00 188 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 PPIL1Q9Y3C6 166 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 PCDHB1Q9Y5F3 818 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 NOTCH4Q99466 2003 aa9.77□□□□□ -0.85
USP39-214ENST00000474572 A0A1W2PRU2 124 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 UBA6A0AVT1 1052 aaPredicted RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 CAPN8A6NHC0 703 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 K7ERQ8 282 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 NEMP1O14524 444 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 SMAD6O43541 496 aaKnown RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 FKBP6O75344 327 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 MOSPD3O75425 235 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 VPS26AO75436 327 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CDK14O94921 469 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PRAMEF12O95522 483 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CXCL14O95715 111 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 IGSF6O95976 241 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 ESR1P03372 595 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 SPATA31D3P0C874 917 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 HOXA9P31269 272 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 FMO4P31512 558 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CD70P32970 193 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CCR2P41597 374 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 ABL2P42684 1182 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CDKN1CP49918 316 aaPredicted RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 MTTPP55157 894 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 C1QTNF8P60827 252 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 IRX1P78414 480 aaPredicted RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 CACNG1Q06432 222 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 RAD51Q06609 339 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CUL3Q13618 768 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PTK2BQ14289 1009 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PTPRNQ16849 979 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 C6orf163Q5TEZ5 329 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 SPATA31D4Q6ZUB0 917 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 OTOP2Q7RTS6 562 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 LYSMD3Q7Z3D4 306 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 ELMOD1Q8N336 334 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CBARPQ8N350 705 aaPredicted RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 EFHBQ8N7U6 833 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PTGR2Q8N8N7 351 aaPredicted RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 GIMAP7Q8NHV1 300 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 HMGCLL1Q8TB92 370 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 SHKBP1Q8TBC3 707 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 STAG3L4Q8TBR4 150 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 DDI1Q8WTU0 396 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 JADE3Q92613 823 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 ECHDC3Q96DC8 303 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PHF21BQ96EK2 531 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PDLIM5Q96HC4 596 aaKnown RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 CLPTM1LQ96KA5 538 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CATSPER2Q96P56 530 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 TUBGCP5Q96RT8 1024 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 GPR21Q99679 349 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 SLC30A3Q99726 388 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 EMILIN2Q9BXX0 1053 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 SHCBP1LQ9BZQ2 653 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CCDC68Q9H2F9 335 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 ASAH2Q9NR71 780 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 GTSE1Q9NYZ3 720 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CDH22Q9UJ99 828 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 MCM8Q9UJA3 840 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 CLEC4EQ9ULY5 219 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 HS3ST2Q9Y278 367 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 TRAF6Q9Y4K3 522 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 LRRC42Q9Y546 428 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 INSL6Q9Y581 213 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 PCDHB9Q9Y5E1 797 aa9.76□□□□□ -0.85
USP39-214ENST00000474572 COPG1Q9Y678 874 aaKnown RBP9.76□□□□□ -0.85
USP39-214ENST00000474572 SYCE1LA8MT33 242 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 AGAP14A8MT82 685 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 UBXN8O00124 270 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 SCAMP3O14828 347 aaKnown RBP9.75□□□□□ -0.85
USP39-214ENST00000474572 NIPSNAP2O75323 286 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 TBX10O75333 385 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 ECI2O75521 394 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 SUPT7LO94864 414 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 GLUD1P00367 558 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 FGBP02675 491 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 POU2F2P09086 479 aa9.75□□□□□ -0.85
USP39-214ENST00000474572 SRCP12931 536 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms