RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PID1Q7Z2X4 250 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 LYSMD3Q7Z3D4 306 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 TMC3Q7Z5M5 1100 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 TRIM74Q86UV6 250 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 SFTPA2Q8IWL1 248 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 LSMEM2Q8N112 164 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 ZNF567Q8N184 647 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 SPC24Q8NBT2 197 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 HTR3CQ8WXA8 447 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 HAUS1Q96CS2 278 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 EID2BQ96D98 161 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 COX14Q96I36 57 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 QKIQ96PU8 341 aaKnown RBP eCLIP11.12□□□□□ -0.632e-10■■■■■ 36
CKS1B-206ENST00000474215 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
CKS1B-206ENST00000474215 CDH19Q9H159 772 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 UBP1Q9NZI7 540 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 TAAR2Q9P1P5 351 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 LRIT1Q9P2V4 623 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 FAM153AQ9UHL3 310 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 TRHDEQ9UKU6 1024 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 CNOT6Q9ULM6 557 aaKnown RBP11.12□□□□□ -0.63
CKS1B-206ENST00000474215 GPSM3Q9Y4H4 160 aa11.12□□□□□ -0.63
CKS1B-206ENST00000474215 LOC285095A0A1B0GVY8 99 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 GRID2IPA4D2P6 1211 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 B4DGG1 531 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 H7C0C1 242 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 NTN3O00634 580 aaPredicted RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 CASC3O15234 703 aaKnown RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 NUDT21O43809 227 aaKnown RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ASMTLO95671 621 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 EPOP01588 193 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ATP1A1P05023 1023 aaKnown RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 MPOP05164 745 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 PIRTP0C851 137 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 PNLIPP16233 465 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 NFKB1P19838 968 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 AK4P27144 223 aaPredicted RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 PTPN7P35236 360 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ACTN2P35609 894 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 CETN2P41208 172 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ATP5OP48047 213 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 WNT3AP56704 352 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 CCL7P80098 99 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 SPIDRQ14159 915 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 NOMO1Q15155 1222 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 PYCR3Q53H96 274 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 CERCAMQ5T4B2 595 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 SLC30A9Q6PML9 568 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 KDELC1Q6UW63 502 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 MARK2Q7KZI7 788 aaKnown RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 TXLNBQ8N3L3 684 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ALG3Q92685 438 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 FGF11Q92914 225 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ATXN7L3BQ96GX2 97 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 OR2M4Q96R27 311 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 FCRL5Q96RD9 977 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 GFM1Q96RP9 751 aaKnown RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 OSBPL8Q9BZF1 889 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 GPR63Q9BZJ6 419 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 SYNDIG1Q9H7V2 258 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 POLR1BQ9H9Y6 1135 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 VPS18Q9P253 973 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 KLHL8Q9P2G9 620 aaPredicted RBP11.11□□□□□ -0.63
CKS1B-206ENST00000474215 SHOC2Q9UQ13 582 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ZNF711Q9Y462 761 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ENTPD2Q9Y5L3 495 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 ST14Q9Y5Y6 855 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 RNF215Q9Y6U7 377 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 KNTC1P50748 2209 aa11.11□□□□□ -0.63
CKS1B-206ENST00000474215 LRP4O75096 1905 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 A0A087WV48 116 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 A0A1W2PQM1 296 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 FADS2P1A8MWK0 482 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 DXOO77932 396 aaKnown RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 TJP3O95049 919 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 RPLP0P05388 317 aaKnown RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 PYGMP11217 842 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 RBL1P28749 1068 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 EIF2S3P41091 472 aaKnown RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 TNNT3P45378 269 aaPredicted RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 GABREP78334 506 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 LRP8Q14114 963 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 C19orf48Q6RUI8 117 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 PEX26Q7Z412 305 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 C17orf82Q86X59 251 aaPredicted RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 GALNT13Q8IUC8 556 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 CCNJLQ8IV13 435 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 SYCE1Q8N0S2 351 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 Q8N9G6 341 aaPredicted RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 GPR26Q8NDV2 337 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 ACTL9Q8TC94 416 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 ZDHHC1Q8WTX9 485 aa11.1□□□□□ -0.63
CKS1B-206ENST00000474215 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
CKS1B-206ENST00000474215 OXNAD1Q96HP4 312 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms