RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ZNF155Q12901 538 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 EFNB3Q15768 340 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 C9orf139Q6ZV77 190 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 ZNF771Q7L3S4 317 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 AGBL3Q8NEM8 1001 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 CREB3L4Q8TEY5 395 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 RUFY2Q8WXA3 655 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 ERGIC1Q969X5 290 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 FBXL8Q96CD0 374 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 RIC8AQ9NPQ8 531 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 SNTG1Q9NSN8 517 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 CISD1Q9NZ45 108 aaKnown RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 SLC9A2Q9UBY0 812 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 CNOT7Q9UIV1 285 aaKnown RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 VDAC3Q9Y277 283 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 GPR52Q9Y2T5 361 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 PLEKHG2Q9H7P9 1386 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 RGPD1P0DJD0 1748 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 ABCA3Q99758 1704 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 CAMTA1Q9Y6Y1 1673 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 HNRNPCL2B2RXH8 293 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 HTATSF1O43719 755 aaKnown RBP5.54□□□□□ -1.52
CCDC39-202ENST00000471307 NDUFS7O75251 213 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 PLGP00747 810 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-202ENST00000471307 HEXAP06865 529 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 MCM3P25205 808 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 POU1F1P28069 291 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 PGM1P36871 562 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 RIPK4P57078 832 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 LMOD3Q0VAK6 560 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 KRTAP24-1Q3LI83 254 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 TOM1L2Q6ZVM7 507 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 FOXP4Q8IVH2 680 aaPredicted RBP5.54□□□□□ -1.52
CCDC39-202ENST00000471307 WDR63Q8IWG1 891 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 LMNTD1Q8N9Z9 388 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 SPATA20Q8TB22 786 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 TANKQ92844 425 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 ELP4Q96EB1 424 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 C3orf30Q96M34 536 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 NODALQ96S42 347 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 C17orf75Q9HAS0 396 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 PCDHAC2Q9Y5I4 1007 aa5.54□□□□□ -1.52
CCDC39-202ENST00000471307 COL14A1Q05707 1796 aaKnown RBP5.54□□□□□ -1.52
CCDC39-202ENST00000471307 LMO7Q8WWI1 1683 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 MMP2P08253 660 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 ETFAP13804 333 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 HSD3B1P14060 373 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 ANOS1P23352 680 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 EFNB1P98172 346 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 CALD1Q05682 793 aaKnown RBP5.53□□□□□ -1.52
CCDC39-202ENST00000471307 FOXD4Q12950 439 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-202ENST00000471307 VEPH1Q14D04 833 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 HIST2H2ACQ16777 129 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-202ENST00000471307 ACCSLQ4AC99 568 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 ZNF766Q5HY98 468 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 ZNF667Q5HYK9 610 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 GPAT4Q86UL3 456 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 BEST2Q8NFU1 509 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 LNX1Q8TBB1 728 aaPredicted RBP5.53□□□□□ -1.52
CCDC39-202ENST00000471307 PPM1EQ8WY54 764 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 PCDH9Q9HC56 1237 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 NOX4Q9NPH5 578 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 NCAPD2Q15021 1401 aa5.53□□□□□ -1.52
CCDC39-202ENST00000471307 FAM208AQ9UK61 1670 aaKnown RBP5.53□□□□□ -1.52
CCDC39-202ENST00000471307 RGPD2P0DJD1 1756 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 COL5A2P05997 1499 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 CRB1P82279 1406 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 PLRG1O43660 514 aaKnown RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 CREB3O43889 395 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 PIP5K1CO60331 668 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 SP1P08047 785 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 DDX5P17844 614 aaKnown RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 AGAP20933 346 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 CCR5P51681 352 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 MTHFSDQ2M296 383 aaKnown RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 LCE1EQ5T753 118 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 CCNI2Q6ZMN8 369 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 KRBA2Q6ZNG9 492 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 FOXL2NBQ6ZUU3 175 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 LRRTM4Q86VH4 590 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 SFR1Q86XK3 245 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 UNC5CLQ8IV45 518 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 CPOQ8IVL8 374 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 DCUN1D3Q8IWE4 304 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 ZBTB8BQ8NAP8 495 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 ZCCHC10Q8TBK6 192 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 FIG4Q92562 907 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 CD101Q93033 1021 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF570Q96NI8 536 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 INTS2Q9H0H0 1204 aaKnown RBP5.52□□□□□ -1.53
CCDC39-202ENST00000471307 TMEM160Q9NX00 188 aa5.52□□□□□ -1.53
CCDC39-202ENST00000471307 IL16Q14005 1332 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 TAF4O00268 1085 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 MT-CYBP00156 380 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-202ENST00000471307 NLRP5P59047 1200 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 ARL16Q0P5N6 197 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 ZBTB17Q13105 803 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 NFIL3Q16649 462 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 SYT16Q17RD7 645 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 KRT24Q2M2I5 525 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms