RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SNAP91O60641 907 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ZNF821O75541 412 aaPredicted RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 CYP1A1P04798 512 aaPredicted RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 ITIH2P19823 946 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 RRM1P23921 792 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 OR1E1P30953 314 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ETFBP38117 255 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 GABRB2P47870 512 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 CXCR3P49682 368 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 UBASH3AP57075 661 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 RAB15P59190 212 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SRP54P61011 504 aaKnown RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 MC2RQ01718 297 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 FOLH1Q04609 750 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 CDSNQ15517 529 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 C15orf59Q2T9L4 293 aaPredicted RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 LRRC73Q5JTD7 316 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SPECC1LQ69YQ0 1117 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SCYL2Q6P3W7 929 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 BHLHB9Q6PI77 547 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ENPP7Q6UWV6 458 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 DPY19L3Q6ZPD9 716 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 TAF8Q7Z7C8 310 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 DRC7Q8IY82 874 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 RYBPQ8N488 228 aaPredicted RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 PAF1Q8N7H5 531 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ATP11CQ8NB49 1132 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 TP53I13Q8NBR0 393 aaPredicted RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 C3orf20Q8ND61 904 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 CCDC112Q8NEF3 446 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 OR4D9Q8NGE8 314 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 FAM172AQ8WUF8 416 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 PATE1Q8WXA2 126 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 RXFP2Q8WXD0 754 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 VOPP1Q96AW1 172 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ZNF653Q96CK0 615 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 TRIM11Q96F44 468 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 RBM15Q96T37 977 aaKnown RBP eCLIP5.85□□□□□ -1.47
VARS-222ENST00000470953 PSMB7Q99436 277 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 NPY6RQ99463 290 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SPOCK3Q9BQ16 436 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 FEM1AQ9BSK4 669 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SPON2Q9BUD6 331 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 NUDT9Q9BW91 350 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ZYG11BQ9C0D3 744 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 TSPY26PQ9H489 355 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 DPEP2Q9H4A9 486 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 ATP13A1Q9HD20 1204 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SPATS2LQ9NUQ6 558 aaKnown RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 ARHGEF38Q9NXL2 777 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 IL36AQ9UHA7 158 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 HPCAL4Q9UM19 191 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 MYO6Q9UM54 1294 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 SNX10Q9Y5X0 201 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 COPG1Q9Y678 874 aaKnown RBP5.85□□□□□ -1.47
VARS-222ENST00000470953 FER1L5A0AVI2 2057 aa5.85□□□□□ -1.47
VARS-222ENST00000470953 CHD3Q12873 2000 aaKnown RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 CHD5Q8TDI0 1954 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 A0A1B0GTH6 734 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 ARGFXA6NJG6 315 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 FAM171A2A8MVW0 826 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 PPM1DO15297 605 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 TEX33O43247 280 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 ATMINO43313 823 aaPredicted RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 AP1G1O43747 822 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 CREB3O43889 395 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 MMP20O60882 483 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 CREG1O75629 220 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 RASGRP1O95267 797 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 CHRNB2P17787 502 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 TFE3P19532 575 aaPredicted RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 PSMA2P25787 234 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 GKP32189 559 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 PTPN9P43378 593 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 DNA2P51530 1060 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 GEMIN4P57678 1058 aaKnown RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 TPI1P60174 286 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 RPS18P62269 152 aaKnown RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 YPEL5P62699 121 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 CSNK1G2P78368 415 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 FANCCQ00597 558 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 CCDC15Q0P6D6 951 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 TRA2AQ13595 282 aaKnown RBP eCLIP5.84□□□□□ -1.47
VARS-222ENST00000470953 NR1D2Q14995 579 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 IRF4Q15306 451 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 NFKBIBQ15653 356 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 CHRNA6Q15825 494 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 TSR1Q2NL82 804 aaKnown RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 SNAP47Q5SQN1 464 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 OTUD1Q5VV17 481 aaPredicted RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 RETSATQ6NUM9 610 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 DPY19L2P1Q6NXN4 242 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 MON1BQ7L1V2 547 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 STRADAQ7RTN6 431 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 SETD3Q86TU7 594 aaPredicted RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 TMEM200AQ86VY9 491 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 KCNMB4Q86W47 210 aa5.84□□□□□ -1.47
VARS-222ENST00000470953 C17orf82Q86X59 251 aaPredicted RBP5.84□□□□□ -1.47
VARS-222ENST00000470953 PHF13Q86YI8 300 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms