RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 LRRN3Q9H3W5 708 aa16.3■□□□□ 0.2
GTF3C2-209ENST00000470115 GLOD4Q9HC38 313 aa16.3■□□□□ 0.2
GTF3C2-209ENST00000470115 LUC7LQ9NQ29 371 aaKnown RBP16.3■□□□□ 0.2
GTF3C2-209ENST00000470115 APPL1Q9UKG1 709 aa16.3■□□□□ 0.2
GTF3C2-209ENST00000470115 EPN1Q9Y6I3 576 aaPredicted RBP16.3■□□□□ 0.2
GTF3C2-209ENST00000470115 ARHGEF17Q96PE2 2063 aaPredicted RBP16.3■□□□□ 0.2
GTF3C2-209ENST00000470115 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 D6RAR5 112 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 NDUFA10O95299 355 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 ASMTLO95671 621 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 PYGLP06737 847 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 PIRTP0C851 137 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 MAZP56270 477 aaKnown RBP16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 CDK18Q07002 472 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 PRKD1Q15139 912 aaPredicted RBP16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 PCSK7Q16549 785 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 TFDP3Q5H9I0 405 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 LYSMD3Q7Z3D4 306 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 B3GNT8Q7Z7M8 397 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 CCNJLQ8IV13 435 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 RAVER1Q8IY67 606 aaKnown RBP16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 RCOR2Q8IZ40 523 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 ZDHHC1Q8WTX9 485 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 TADA1Q96BN2 335 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 PRR11Q96HE9 360 aaPredicted RBP16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 NAF1Q96HR8 494 aaKnown RBP16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 COX14Q96I36 57 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 FAM83DQ9H4H8 585 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 ASCL3Q9NQ33 180 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 PKD2L2Q9NZM6 624 aa16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 CNOT6Q9ULM6 557 aaKnown RBP16.29■□□□□ 0.2
GTF3C2-209ENST00000470115 KIF26BQ2KJY2 2108 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 hCG_1818297A0A087WSY0 165 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 GOLGA6L6A8MZA4 724 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 NUDT21O43809 227 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 ECEL1O95672 775 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 MT-CYBP00156 380 aaPredicted RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 ATP1A1P05023 1023 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 PNLIPP16233 465 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 PTPN3P26045 913 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 RBMS1P29558 406 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 ERVPABLB-1P60509 514 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 PYCR3Q53H96 274 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 HENMT1Q5T8I9 393 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 SPRED1Q7Z699 444 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 ZC3H18Q86VM9 953 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 C17orf82Q86X59 251 aaPredicted RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 CCDC50Q8IVM0 306 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 WDR36Q8NI36 951 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 PATE1Q8WXA2 126 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 KRT35Q92764 455 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 P3H4Q92791 437 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 HAUS1Q96CS2 278 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 EID2BQ96D98 161 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 TEKT5Q96M29 485 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 OR2M4Q96R27 311 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 CDH19Q9H159 772 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 EPB41L5Q9HCM4 733 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 UBP1Q9NZI7 540 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 ZNHIT2Q9UHR6 403 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 ATXN7L1Q9ULK2 861 aaPredicted RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 SHOC2Q9UQ13 582 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 OAS3Q9Y6K5 1087 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 DUSP10Q9Y6W6 482 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 CACNA1GO43497 2377 aa16.28■□□□□ 0.2
GTF3C2-209ENST00000470115 CCDC187A0A096LP49 1063 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 RGSL1A5PLK6 1076 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 FADS2P1A8MWK0 482 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 B4GAT1O43505 415 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 PMPCBO75439 489 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 FECHP22830 423 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 CD68P34810 354 aaPredicted RBP16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 ACTR1BP42025 376 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 PCBP4P57723 403 aaKnown RBP16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 ACTR1AP61163 376 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 B4GALNT1Q00973 533 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 WASHC5Q12768 1159 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 SLC14A2Q15849 920 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 IGF2-ASQ6U949 168 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 GALNT13Q8IUC8 556 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 ARL14Q8N4G2 192 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 ZNF248Q8NDW4 579 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 RBM41Q96IZ5 413 aaKnown RBP16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 HEMGNQ9BXL5 484 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 ZFYVE1Q9HBF4 777 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 MAGEE1Q9HCI5 957 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 THSD1Q9NS62 852 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 PRKAB1Q9Y478 270 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 PCDHGA8Q9Y5G5 932 aa16.27■□□□□ 0.2
GTF3C2-209ENST00000470115 LOC400499M0QZD8 3231 aa16.27■□□□□ 0.19
GTF3C2-209ENST00000470115 UNC13CQ8NB66 2214 aa16.27■□□□□ 0.19
GTF3C2-209ENST00000470115 RHPN2P1A8MT19 583 aa16.26■□□□□ 0.19
GTF3C2-209ENST00000470115 TNFSF15O95150 251 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms