RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 UNC5DQ6UXZ4 953 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 SHFQ7M4L6 423 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 R3HCC1LQ7Z5L2 792 aaKnown RBP3.82□□□□□ -1.8
VPS50-209ENST00000467326 GPAT4Q86UL3 456 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CCDC170Q8IYT3 715 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 GDAP1Q8TB36 358 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 ZNF653Q96CK0 615 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 LMLNQ96KR4 655 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 LRFN5Q96NI6 719 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 PI4K2AQ9BTU6 479 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 HGH1Q9BTY7 390 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 MXD3Q9BW11 206 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 IL25Q9H293 177 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 ERVMER34-1Q9H9K5 563 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 BEX4Q9NWD9 120 aaPredicted RBP3.82□□□□□ -1.8
VPS50-209ENST00000467326 BABAM1Q9NWV8 329 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 KIAA1456Q9P272 454 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CTNNAL1Q9UBT7 734 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 MORF4L1Q9UBU8 362 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 PCDHGB4Q9UN71 923 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 ATP6V0A2Q9Y487 856 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 ABCC9O60706 1549 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 IGLV5-37A0A075B6J1 123 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SRRM3A6NNA2 597 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 KLRF2D3W0D1 207 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 PLOD2O00469 737 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SLC16A5O15375 505 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 NDUFB4O95168 129 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 HNRNPA1P09651 372 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS50-209ENST00000467326 NR2F1P10589 423 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SP100P23497 879 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 PSMA4P25789 261 aaKnown RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 CHATP28329 748 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 PIGAP37287 484 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 ALDH3A2P51648 485 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 CSE1LP55060 971 aaKnown RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 RBP5P82980 135 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 GRSF1Q12849 480 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS50-209ENST00000467326 EPS8Q12929 822 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SNTA1Q13424 505 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 E2F5Q15329 346 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 MMEL1Q495T6 779 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 KRTCAP3Q53RY4 240 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 XKR9Q5GH70 373 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 FAM69BQ5VUD6 431 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 LRRC8EQ6NSJ5 796 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 ALKBH5Q6P6C2 394 aaKnown RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 TMEM81Q6P7N7 255 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 IL27RAQ6UWB1 636 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SLFN11Q7Z7L1 901 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 TADA2BQ86TJ2 420 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SLC9B2Q86UD5 537 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 PLD5Q8N7P1 536 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 ANKRD20A12PQ8NF67 263 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 LILRB1Q8NHL6 650 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 ERGIC1Q969X5 290 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 MTBPQ96DY7 904 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 RNF125Q96EQ8 232 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 GBP5Q96PP8 586 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 SIN3AQ96ST3 1273 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 MXRA8Q9BRK3 442 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 C1QTNF4Q9BXJ3 329 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 TRIM6Q9C030 488 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 DNAI2Q9GZS0 605 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 ZNF556Q9HAH1 456 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 COMMD8Q9NX08 183 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 ADPRHL2Q9NX46 363 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 CISD1Q9NZ45 108 aaKnown RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 CHORDC1Q9UHD1 332 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 ZNF215Q9UL58 517 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 CYP46A1Q9Y6A2 500 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 CKAP5Q14008 2032 aa3.81□□□□□ -1.8
VPS50-209ENST00000467326 TRIP12Q14669 1992 aaPredicted RBP3.81□□□□□ -1.8
VPS50-209ENST00000467326 A0A1B0GUV1 79 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 PTGES3LE9PB15 166 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 WNT9BO14905 357 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 BEST1O76090 585 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 GUCA1CO95843 209 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SLC4A1P02730 911 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 URODP06132 367 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 ATP5BP06576 529 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 IGHV4-30-4P0DP06 118 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 KRT13P13646 458 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 PRPHP41219 470 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 RGS2P41220 211 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 PAFAH1B1P43034 410 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 LMAN1P49257 510 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 PEX5P50542 639 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 EFNA5P52803 228 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 LIMK1P53667 647 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 CDH15P55291 814 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 SH3BGRP55822 239 aaPredicted RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 ERVFC1-1P60608 527 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 AKAP17AQ02040 695 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 EEF1A2Q05639 463 aaKnown RBP3.8□□□□□ -1.8
VPS50-209ENST00000467326 LRRC74AQ0VAA2 488 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 STK4Q13043 487 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 VEPH1Q14D04 833 aa3.8□□□□□ -1.8
VPS50-209ENST00000467326 GPR68Q15743 365 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms