RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 FCAMRQ8WWV6 532 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 ZBTB10Q96DT7 871 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 FUZQ9BT04 418 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 FSD1Q9BTV5 496 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 TTC7AQ9ULT0 858 aaPredicted RBP2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 A0A087X002 238 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 IGKV3D-20A0A0C4DH25 116 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 A0A1W2PP11 408 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 C5orf60A6NFR6 353 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 VCYO14598 125 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNHIT1O43257 154 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 SYNGR3O43761 229 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 TCEA3O75764 348 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 GABRB2P47870 512 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 CDH15P55291 814 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 CSNK2A1P68400 391 aaPredicted RBP2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 PDE1BQ01064 536 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 PPP2R5BQ15173 497 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 DUS1LQ6P1R4 473 aaKnown RBP2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 FAM171BQ6P995 826 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC22A25Q6T423 547 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 LRRC8DQ7L1W4 858 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 SPATA5Q8NB90 893 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 CSNK2A3Q8NEV1 391 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 HMGCLL1Q8TB92 370 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 THAP6Q8TBB0 222 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 TM9SF4Q92544 642 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 TAAR8Q969N4 342 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNF354BQ96LW1 612 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 NEUROD6Q96NK8 337 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNF599Q96NL3 588 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 QRFPRQ96P65 431 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 EGFL8Q99944 293 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 NEURL2Q9BR09 285 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 NDST4Q9H3R1 872 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 LTB4R2Q9NPC1 389 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC52A3Q9NQ40 469 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 FAM118AQ9NWS6 357 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 C2orf42Q9NWW7 574 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 A4GNTQ9UNA3 340 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 ERVK-11Q9UQG0 969 aa2.78□□□□□ -1.96
GTF3C3-209ENST00000466862 IGLV5-45A0A087WSX0 123 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 SMIM1B2RUZ4 78 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 SEC14L5O43304 696 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 CTSVO60911 334 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 CRLF1O75462 422 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 EGFP01133 1207 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 GNB3P16520 340 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 POLR2CP19387 275 aaPredicted RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 HOXC8P31273 242 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 APOBEC1P41238 236 aaKnown RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 CLDN20P56880 219 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 UFM1P61960 85 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 LMO4P61968 165 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 EEF1A1P68104 462 aaKnown RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 SORDQ00796 357 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 DECR1Q16698 335 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 EEF1A1P5Q5VTE0 462 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 SFMBT2Q5VUG0 894 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 OR7E24Q6IFN5 339 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 CPLX2Q6PUV4 134 aaKnown RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 ZNF704Q6ZNC4 412 aaPredicted RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 C15orf39Q6ZRI6 1047 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 DPPA4Q7L190 304 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 CCT6BQ92526 530 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 ORAI1Q96D31 301 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 LINGO1Q96FE5 620 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 SENP5Q96HI0 755 aaPredicted RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 LRR1Q96L50 414 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 KLHL15Q96M94 604 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 MPHOSPH8Q99549 860 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 IFIH1Q9BYX4 1025 aaKnown RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 BRF2Q9HAW0 419 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 CNOT7Q9UIV1 285 aaKnown RBP2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 KCNK7Q9Y2U2 307 aa2.77□□□□□ -1.97
GTF3C3-209ENST00000466862 TEX13CA0A0J9YWL9 993 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 EIF3DO15371 548 aaKnown RBP eCLIP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 PCDH7O60245 1069 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 PIP5K1CO60331 668 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 GUCY1B2O75343 617 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 PRSS56P0CW18 603 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 IRF1P10914 325 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 CDAP32320 146 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 AHRP35869 848 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 PGM1P36871 562 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 UBA7P41226 1012 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 FOXM1Q08050 763 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 SPOCK1Q08629 439 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 NFIL3Q16649 462 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 USP41Q3LFD5 358 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 SLC9B1Q4ZJI4 515 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ZC2HC1CQ53FD0 456 aaPredicted RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 C6orf141Q5SZD1 244 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ZNF772Q68DY9 489 aaPredicted RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 SLC27A1Q6PCB7 646 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ATF7IPQ6VMQ6 1270 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 ANO5Q75V66 913 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 TRPT1Q86TN4 253 aaKnown RBP2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 HAPLN4Q86UW8 402 aa2.76□□□□□ -1.97
GTF3C3-209ENST00000466862 SRBD1Q8N5C6 995 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms