RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SOCS5O75159 536 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 TRBC1P01850 177 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 ZNF37AP17032 561 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-205ENST00000466192 PGM1P36871 562 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 KCNC1P48547 511 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 RPL26P61254 145 aaKnown RBP18.19■□□□□ 0.5
COL9A3-205ENST00000466192 SETMARQ53H47 684 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-205ENST00000466192 ZRANB3Q5FWF4 1079 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 LY6G5CQ5SRR4 150 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 ZSWIM9Q86XI8 627 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 PHTF2Q8N3S3 785 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 PHF21BQ96EK2 531 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 OSBPL1AQ9BXW6 950 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 ATP13A3Q9H7F0 1226 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 POPDC3Q9HBV1 291 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 RPL26L1Q9UNX3 145 aaKnown RBP18.19■□□□□ 0.5
COL9A3-205ENST00000466192 PKP3Q9Y446 797 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 REV3LO60673 3130 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 CXorf51AA0A1B0GTR3 108 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 A8MT66 165 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 MEI4A8MW99 385 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 GPR39O43194 453 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 ZBTB14O43829 449 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 IPO13O94829 963 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 HNRNPLP14866 589 aaKnown RBP eCLIP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 CD1DP15813 335 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 EPHA3P29320 983 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 DNAJB13P59910 316 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 GPM6BQ13491 265 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PIWIL4Q7Z3Z4 852 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 ADGRG2Q8IZP9 1017 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PTERQ96BW5 349 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 BIRC8Q96P09 236 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 TBC1D14Q9P2M4 693 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 SUFUQ9UMX1 484 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 CEP290O15078 2479 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 GRID2O43424 1007 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 OR1I1O60431 355 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 NPHS1O60500 1241 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PEX11AO75192 247 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 SRP72O76094 671 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PABPC1P11940 636 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 TTPAP49638 278 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 SNRPD1P62314 119 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PDAP1Q13442 181 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PTPRNQ16849 979 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 PREPLQ4J6C6 727 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 WASHC2DQ5SRD0 308 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 RPS27LQ71UM5 84 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 ITFG1Q8TB96 612 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 ISG20Q96AZ6 181 aaKnown RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 HECAQ9UBI9 543 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-205ENST00000466192 SLCO3A1Q9UIG8 710 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 FAM50BQ9Y247 325 aa18.18■□□□□ 0.5
COL9A3-205ENST00000466192 TMEM233B4DJY2 109 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 TRIM24O15164 1050 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 BNIP3LO60238 219 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 RHOBTB1O94844 696 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 JUNP05412 331 aaKnown RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 SERPINA4P29622 427 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 HNF1BP35680 557 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 CDKN3Q16667 212 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 MYLK3Q32MK0 819 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 PAF1Q8N7H5 531 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 CCDC126Q96EE4 140 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 MMADHCQ9H3L0 296 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 ZFYVE1Q9HBF4 777 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 NKX1-2Q9UD57 310 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 SLC25A13Q9UJS0 675 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 MRPS23Q9Y3D9 190 aaKnown RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 C1orf232A0A0U1RR37 186 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 HK2P52789 917 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 PDCD2Q16342 344 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 ACCSLQ4AC99 568 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 SH2D4BQ5SQS7 431 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 PDE12Q6L8Q7 609 aaKnown RBP18.17■□□□□ 0.5
COL9A3-205ENST00000466192 PAQR3Q6TCH7 311 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 ADIPOR2Q86V24 386 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 ARHGAP24Q8N264 748 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 MYLIPQ8WY64 445 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 LRRC3BQ96PB8 259 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 CCDC68Q9H2F9 335 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 CERS4Q9HA82 394 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 TAS2R13Q9NYV9 303 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 GALPQ9UBC7 116 aa18.17■□□□□ 0.5
COL9A3-205ENST00000466192 PIKFYVEQ9Y2I7 2098 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 LOC100653049A0A140TA62 436 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 H3BMM5 538 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 ZNF197O14709 1029 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 KRT34O76011 436 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 CLDN7O95471 211 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 TCF3P15923 654 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 SP100P23497 879 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-205ENST00000466192 ECT2LQ008S8 904 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 LSM12Q3MHD2 195 aaKnown RBP18.16■□□□□ 0.5
COL9A3-205ENST00000466192 CTSL3PQ5NE16 218 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms