RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 IL17CQ9P0M4 197 aa11.82□□□□□ -0.52
APTX-213ENST00000465003 RNF14Q9UBS8 474 aa11.82□□□□□ -0.52
APTX-213ENST00000465003 PRKAB1Q9Y478 270 aa11.82□□□□□ -0.52
APTX-213ENST00000465003 OAS3Q9Y6K5 1087 aaKnown RBP11.82□□□□□ -0.52
APTX-213ENST00000465003 GAPDHSO14556 408 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 STX7O15400 261 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 FUCA1P04066 466 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 F7P08709 466 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 IVDP26440 423 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CDKN1CP49918 316 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 ARSDP51689 593 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 ZNF140P52738 457 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 EIF2B5Q13144 721 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 C1orf61Q13536 156 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 AGERQ15109 404 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 SHBQ15464 509 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CHRNA6Q15825 494 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 ATP13A5Q4VNC0 1218 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 IZUMO3Q5VZ72 239 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
APTX-213ENST00000465003 NOA1Q8NC60 698 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 BRSK1Q8TDC3 778 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 PPP1R2P1Q96PQ5 205 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CHRAC1Q9NRG0 131 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 UCKL1Q9NWZ5 548 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 SYBUQ9NX95 663 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 IL1RAPL1Q9NZN1 696 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 TMPRSS11EQ9UL52 423 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 SNX24Q9Y343 169 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 PKP3Q9Y446 797 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 HS3ST3A1Q9Y663 406 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 LRP4O75096 1905 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CEP250Q9BV73 2442 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 SPTY2D1-AS1A0A0U1RR47 76 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 ESYT3A0FGR9 886 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 LPOP22079 712 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 NUDT1P36639 197 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 RABIFP47224 123 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 TAF1AQ15573 450 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 KHDC1Q4VXA5 237 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 RNASEH2BQ5TBB1 312 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 LINC00523Q86TU6 105 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CAND1Q86VP6 1230 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 HID1Q8IV36 788 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 NAT8LQ8N9F0 302 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 ASB12Q8WXK4 309 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 SLCO2A1Q92959 643 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CAMK1GQ96NX5 476 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 ELF4Q99607 663 aaPredicted RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 GPR27Q9NS67 375 aa11.81□□□□□ -0.52
APTX-213ENST00000465003 CNOT6Q9ULM6 557 aaKnown RBP11.81□□□□□ -0.52
APTX-213ENST00000465003 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 ASPMQ8IZT6 3477 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 PLXNB3Q9ULL4 1909 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.8□□□□□ -0.52
APTX-213ENST00000465003 C2orf81A6NN90 581 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 ERI2A8K979 691 aaKnown RBP11.8□□□□□ -0.52
APTX-213ENST00000465003 EFCAB8A8MWE9 144 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
APTX-213ENST00000465003 ABCB7O75027 752 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 LRP3O75074 770 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 PRAMEF1O95521 474 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 SYPP08247 313 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TSHRP16473 764 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TPSB2P20231 275 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TRIM23P36406 574 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 SPAM1P38567 509 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 NFATC4Q14934 902 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TPSAB1Q15661 275 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 STPG1Q5TH74 334 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 RABEPKQ7Z6M1 372 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 PARGQ86W56 976 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 CCL4L1Q8NHW4 92 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 SERPINB12Q96P63 405 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 CYP4F12Q9HCS2 524 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TMEM9BQ9NQ34 198 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 EIF2B3Q9NR50 452 aaKnown RBP11.8□□□□□ -0.52
APTX-213ENST00000465003 TM7SF3Q9NS93 570 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 HACD3Q9P035 362 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 TPX2Q9ULW0 747 aaKnown RBP11.8□□□□□ -0.52
APTX-213ENST00000465003 BTBD3Q9Y2F9 522 aa11.8□□□□□ -0.52
APTX-213ENST00000465003 ZNF106Q9H2Y7 1883 aaKnown RBP11.8□□□□□ -0.52
APTX-213ENST00000465003 GLYATL1P3A0A0U1RQE8 302 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 GOLGA8KD6RF30 607 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 GOLGA8TH3BQL2 631 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
APTX-213ENST00000465003 CACNB4O00305 520 aaPredicted RBP11.79□□□□□ -0.52
APTX-213ENST00000465003 TP73O15350 636 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 FFAR2O15552 330 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 PSMD3O43242 534 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 ASMTLO95671 621 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 CRTAMO95727 393 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 MYF5P13349 255 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 NMBRP28336 390 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 DPP6P42658 865 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 ITGA8P53708 1063 aa11.79□□□□□ -0.52
APTX-213ENST00000465003 CKAP4Q07065 602 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms