RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CDK14O94921 469 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MT-CYBP00156 380 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 NPPAP01160 153 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 THRBP10828 461 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MTHFD1P11586 935 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 HOXB8P17481 243 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 CRHBPP24387 322 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 EEF1B2P24534 225 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 ELK4P28324 431 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 EEF1DP29692 281 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 CYP2C18P33260 490 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 IDUAP35475 653 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PLA2G16P53816 162 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 ARSFP54793 590 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SH3BP2P78314 561 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 CCNA1P78396 465 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TOP3AQ13472 1001 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 BFSP2Q13515 415 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 NFYCQ13952 458 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 RCAN2Q14206 197 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 GRB7Q14451 532 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 Q3C1V9 767 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 ZNF618Q5T7W0 954 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 TAF2Q6P1X5 1199 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 RANBP10Q6VN20 620 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 PRR23BQ6ZRT6 265 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 NEK10Q6ZWH5 1172 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 RAB44Q7Z6P3 723 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 ISCA2Q86U28 154 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 FAM35AQ86V20 835 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 APOBEC3FQ8IUX4 373 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 SPARTQ8N0X7 666 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 ATPAF2Q8N5M1 289 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 ANKRD49Q8WVL7 239 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MUL1Q969V5 352 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 AURKBQ96GD4 344 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 CELF6Q96J87 481 aaKnown RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 MUS81Q96NY9 551 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 YIPF2Q9BWQ6 316 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 CHID1Q9BWS9 393 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 ING2Q9H160 280 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 SOX17Q9H6I2 414 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 ALG9Q9H6U8 611 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 OR12D3Q9UGF7 316 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 MAGEL2Q9UJ55 1249 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 ENPP5Q9UJA9 477 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 LEF1Q9UJU2 399 aaPredicted RBP7.28□□□□□ -1.24
USP48-206ENST00000464577 FZD1Q9UP38 647 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 NAALAD2Q9Y3Q0 740 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 GPR45Q9Y5Y3 372 aa7.28□□□□□ -1.24
USP48-206ENST00000464577 YJEFN3A6XGL0 299 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 UPK1AO00322 258 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 CLDN5O00501 218 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 MATN3O15232 486 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 BCAS1O75363 584 aaPredicted RBP7.27□□□□□ -1.25
USP48-206ENST00000464577 DEAF1O75398 565 aaPredicted RBP7.27□□□□□ -1.25
USP48-206ENST00000464577 JRKO75564 520 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 RECQL4O94761 1208 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 APBA3O96018 575 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ALPLP05186 524 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 PRR35P0CG20 571 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 KCNE1P15382 129 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ZNF24P17028 368 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ITIH1P19827 911 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 CHRM3P20309 590 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 HRH2P25021 359 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 HOXA11P31270 313 aaPredicted RBP7.27□□□□□ -1.25
USP48-206ENST00000464577 HTR7P34969 479 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 HPCAL1P37235 193 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 GJA8P48165 433 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 KCNK10P57789 538 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ARHGAP1Q07960 439 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 TRIM32Q13049 653 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 AQP6Q13520 282 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 KCTD2Q14681 263 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 RPS6KA2Q15349 733 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ZNF789Q5FWF6 425 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 RAB41Q5JT25 222 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 TTC23Q5W5X9 447 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 TBPL2Q6SJ96 375 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 SLC16A12Q6ZSM3 486 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 CCDC80Q76M96 950 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 CHST15Q7LFX5 561 aaPredicted RBP7.27□□□□□ -1.25
USP48-206ENST00000464577 EFL1Q7Z2Z2 1120 aaKnown RBP7.27□□□□□ -1.25
USP48-206ENST00000464577 SAMD7Q7Z3H4 446 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ANKRD13BQ86YJ7 626 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ARHGAP12Q8IWW6 846 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 MICALL2Q8IY33 904 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 C8orf59Q8N0T1 100 aaPredicted RBP7.27□□□□□ -1.25
USP48-206ENST00000464577 PIK3C3Q8NEB9 887 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 BPIFB6Q8NFQ5 453 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 SLC22A17Q8WUG5 538 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 BIRC7Q96CA5 298 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 FEM1AQ9BSK4 669 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 FSD1LQ9BXM9 530 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 WDCPQ9H6R7 721 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 NTN4Q9HB63 628 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 ARNT2Q9HBZ2 717 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 SPON1Q9HCB6 807 aa7.27□□□□□ -1.25
USP48-206ENST00000464577 MID1IP1Q9NPA3 183 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms