RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TNFAIP3P21580 790 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 NFKBIAP25963 317 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 TMPOP42166 694 aaKnown RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 CEBPZQ03701 1054 aaKnown RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 ILF3Q12906 894 aaKnown RBP eCLIP5.86□□□□□ -1.477e-7■■■■□ 23.9
PTCD3-205ENST00000464541 MAMLD1Q13495 774 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 KRT32Q14532 448 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 DECR1Q16698 335 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 CDONQ4KMG0 1287 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 BRAT1Q6PJG6 821 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 SEPT14Q6ZU15 432 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 SMRP1Q8NCR6 262 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 OR14L1PQ8NHC6 308 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 THAP6Q8TBB0 222 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 SKA1Q96BD8 255 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 SIL1Q9H173 461 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 RETREG1Q9H6L5 497 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 SLC28A3Q9HAS3 691 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 SMC4Q9NTJ3 1288 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 TMEM30AQ9NV96 361 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 CWC15Q9P013 229 aaKnown RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 A0A0G2JPF8 293 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 HNRNPCL3B7ZW38 293 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 ZNF587BE7ETH6 402 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 TULP2O00295 520 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 HNRNPCL1O60812 293 aaKnown RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 HNRNPCL4P0DMR1 293 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 UBA7P41226 1012 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 DCAF7P61962 342 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 PRAMEP78395 509 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 MRPS34P82930 218 aaKnown RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 SETQ01105 290 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 ZBTB17Q13105 803 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 MAD2L1Q13257 205 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 EIF4A2Q14240 407 aaKnown RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 MYLK3Q32MK0 819 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 HAUS3Q68CZ6 603 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 TTI2Q6NXR4 508 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 GLDNQ6ZMI3 551 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 RNF113BQ8IZP6 322 aaKnown RBP5.85□□□□□ -1.47
PTCD3-205ENST00000464541 BEST3Q8N1M1 668 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 PDILTQ8N807 584 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 SORCS1Q8WY21 1168 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 ORAI1Q96D31 301 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 CDCA5Q96FF9 252 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 EVA1AQ9H8M9 152 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 POLR1BQ9H9Y6 1135 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 RRP7BPQ9NSQ0 103 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 LYVE1Q9Y5Y7 322 aa5.85□□□□□ -1.47
PTCD3-205ENST00000464541 PI4KAP2A4QPH2 592 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 USO1O60763 962 aaKnown RBP5.84□□□□□ -1.47
PTCD3-205ENST00000464541 LDB3O75112 727 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 ACADMP11310 421 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 PRCPP42785 496 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 RXRGP48443 463 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 TAS2R38P59533 333 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 PDE1BQ01064 536 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 LRMPQ12912 555 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 ZNF672Q499Z4 452 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-205ENST00000464541 SNX30Q5VWJ9 437 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 FAM180BQ6P0A1 224 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 C1orf87Q8N0U7 546 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 ZNF441Q8N8Z8 693 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 SECTM1Q8WVN6 248 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 DNAAF4Q8WXU2 420 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 APBB2Q92870 758 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 ABTB1Q969K4 478 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-205ENST00000464541 GRAMD2BQ96HH9 432 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 MTERF1Q99551 399 aaKnown RBP5.84□□□□□ -1.47
PTCD3-205ENST00000464541 KRT84Q9NSB2 600 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 HCFC1R1Q9NWW0 138 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 FBXW11Q9UKB1 542 aa5.84□□□□□ -1.47
PTCD3-205ENST00000464541 KANSL1LA0AUZ9 987 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 PRAC2D3DTV9 90 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 M0QZ24 198 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 HS3ST1O14792 307 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 DDNO94850 711 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-205ENST00000464541 F7P08709 466 aaPredicted RBP5.83□□□□□ -1.48
PTCD3-205ENST00000464541 NLRP5P59047 1200 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 EEF1A1P68104 462 aaKnown RBP5.83□□□□□ -1.48
PTCD3-205ENST00000464541 SLC20A2Q08357 652 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 MED22Q15528 200 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 ZRSR1Q15695 479 aaKnown RBP5.83□□□□□ -1.48
PTCD3-205ENST00000464541 NAB2Q15742 525 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 SYT16Q17RD7 645 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 EEF1A1P5Q5VTE0 462 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 TMEM154Q6P9G4 183 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 GFRALQ6UXV0 394 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 SATL1Q86VE3 508 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 NRROSQ86YC3 692 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 C1orf74Q96LT6 269 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 WDFY2Q96P53 400 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 PKP4Q99569 1192 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 CMKLR1Q99788 373 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 NCAPGQ9BPX3 1015 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 PLEKHA5Q9HAU0 1116 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 KLHL1Q9NR64 748 aa5.83□□□□□ -1.48
PTCD3-205ENST00000464541 PLSCR4Q9NRQ2 329 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms