RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GNPDA1P46926 289 aa12.78□□□□□ -0.36
NUP58-206ENST00000463407 LRRC74BQ6ZQY2 392 aa12.78□□□□□ -0.36
NUP58-206ENST00000463407 LDB1Q86U70 411 aaPredicted RBP12.78□□□□□ -0.36
NUP58-206ENST00000463407 DNAJC11Q9NVH1 559 aa12.78□□□□□ -0.36
NUP58-206ENST00000463407 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
NUP58-206ENST00000463407 R3HDM2Q9Y2K5 976 aaKnown RBP12.78□□□□□ -0.36
NUP58-206ENST00000463407 POLR3HQ9Y535 204 aaPredicted RBP12.78□□□□□ -0.36
NUP58-206ENST00000463407 IRS2Q9Y4H2 1338 aa12.78□□□□□ -0.36
NUP58-206ENST00000463407 H3BNH8 94 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 CD48P09326 243 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 COX4I1P13073 169 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 ITGAXP20702 1163 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 PSMB9P28065 219 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 BLKP51451 505 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 UBAP2LQ14157 1087 aaKnown RBP12.77□□□□□ -0.36
NUP58-206ENST00000463407 CCNYL2Q5T2Q4 361 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 GRASPQ7Z6J2 395 aaPredicted RBP12.77□□□□□ -0.36
NUP58-206ENST00000463407 EPB41L4BQ9H329 900 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 EPS8L2Q9H6S3 715 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 C3orf14Q9HBI5 128 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 GKN1Q9NS71 199 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 NFKBIL1Q9UBC1 381 aaPredicted RBP12.77□□□□□ -0.36
NUP58-206ENST00000463407 FAM25AB3EWG3 89 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 FAM25CB3EWG5 89 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 FAM25GB3EWG6 89 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 ZMPSTE24O75844 475 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 SNUPNO95149 360 aaKnown RBP12.77□□□□□ -0.36
NUP58-206ENST00000463407 SNAI1O95863 264 aaPredicted RBP12.77□□□□□ -0.36
NUP58-206ENST00000463407 HNRNPCP07910 306 aaKnown RBP eCLIP12.77□□□□□ -0.36
NUP58-206ENST00000463407 SLC11A1P49279 550 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 GATMP50440 423 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 JAG1P78504 1218 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 TAF5Q15542 800 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 ARSIQ5FYB1 569 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 ZNF563Q8TA94 476 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 FNIP1Q8TF40 1166 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 CYB5D2Q8WUJ1 264 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 POF1BQ8WVV4 589 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 MTERF3Q96E29 417 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 PANX1Q96RD7 426 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 S100A13Q99584 98 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 ANAPC2Q9UJX6 822 aa12.77□□□□□ -0.36
NUP58-206ENST00000463407 A0A1W2PPM1 405 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 NUDT17P0C025 328 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 BST1Q10588 318 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 CMC1Q7Z7K0 106 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 GPR180Q86V85 440 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 KIAA2013Q8IYS2 634 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 C9orf16Q9BUW7 83 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 ZNF490Q9ULM2 529 aaPredicted RBP12.77□□□□□ -0.37
NUP58-206ENST00000463407 IQCF5A8MTL0 148 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 LYPLA1O75608 230 aaPredicted RBP12.77□□□□□ -0.37
NUP58-206ENST00000463407 BUD31P41223 144 aaPredicted RBP12.77□□□□□ -0.37
NUP58-206ENST00000463407 TEAD2Q15562 447 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 TSNQ15631 228 aaKnown RBP12.77□□□□□ -0.37
NUP58-206ENST00000463407 ZNF605Q86T29 641 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 DNAJB14Q8TBM8 379 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 DTNBP1Q96EV8 351 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 CHRAC1Q9NRG0 131 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 CNTN3Q9P232 1028 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 VNN1O95497 513 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 FGFR3P22607 806 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 HK2P52789 917 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 NAE1Q13564 534 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 ITCHQ96J02 903 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 TBATAQ96M53 351 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 GPR21Q99679 349 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 MECRQ9BV79 373 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 GTPBP2Q9BX10 602 aaKnown RBP12.77□□□□□ -0.37
NUP58-206ENST00000463407 SRMSQ9H3Y6 488 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 RHOJQ9H4E5 214 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 RPS6KA6Q9UK32 745 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 PRKAB1Q9Y478 270 aa12.77□□□□□ -0.37
NUP58-206ENST00000463407 ADSSP30520 456 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 CCR3P51677 355 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 PDK4Q16654 411 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 SNX30Q5VWJ9 437 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 CLEC20AQ6ZU45 233 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 PIWIL4Q7Z3Z4 852 aaKnown RBP12.76□□□□□ -0.37
NUP58-206ENST00000463407 ZNF248Q8NDW4 579 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 STK32AQ8WU08 396 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 PTCD2Q8WV60 388 aaKnown RBP12.76□□□□□ -0.37
NUP58-206ENST00000463407 SLITRK2Q9H156 845 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 EFR3BQ9Y2G0 817 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 ENPEPQ07075 957 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 RNASEH2BQ5TBB1 312 aaKnown RBP12.76□□□□□ -0.37
NUP58-206ENST00000463407 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 CERS6Q6ZMG9 384 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 SETD9Q8NE22 299 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 NUS1Q96E22 293 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 ADAM30Q9UKF2 790 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 ENO4A6NNW6 628 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 RECQL5O94762 991 aaPredicted RBP12.76□□□□□ -0.37
NUP58-206ENST00000463407 CLPTM1O96005 669 aa12.76□□□□□ -0.37
NUP58-206ENST00000463407 TXNDC8Q6A555 127 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms