RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 PJA2O43164 708 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 USP12O75317 370 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 GCATO75600 419 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 CRTAMO95727 393 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 RPLP0P05388 317 aaKnown RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 IVLP07476 585 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 RBP3P10745 1247 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 PECAM1P16284 738 aaPredicted RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 NFKB1P19838 968 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 LHCGRP22888 699 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 AKT1P31749 480 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 PTPN7P35236 360 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 HALP42357 657 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 ABCG1P45844 678 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 WNT3AP56704 352 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 PCBP4P57723 403 aaKnown RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 GABREP78334 506 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 INSM1Q01101 510 aaPredicted RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 OTUD4Q01804 1114 aaKnown RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 NIPAL4Q0D2K0 466 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 ITGA9Q13797 1035 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 RPS6KA1Q15418 735 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 QPCTQ16769 361 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 C14orf28Q4W4Y0 310 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 TMEM164Q5U3C3 297 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 RAD9BQ6WBX8 426 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 KANSL1Q7Z3B3 1105 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 SLC9B2Q86UD5 537 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 CCNJLQ8IV13 435 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 SLC35F3Q8IY50 421 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 TRAM1L1Q8N609 369 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 CCDC89Q8N998 374 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 OR10G6Q8NH81 332 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 ARRDC2Q8TBH0 407 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 MDM1Q8TC05 714 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 BRSK1Q8TDC3 778 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 OR1E3Q8WZA6 343 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 TMEM159Q96B96 161 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 DCUN1D1Q96GG9 259 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 TTC1Q99614 292 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 SLC38A3Q99624 504 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 DPYSL5Q9BPU6 564 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 HERPUD2Q9BSE4 406 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 DESI2Q9BSY9 194 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 FRMD8P1Q9BZ68 369 aaPredicted RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 ABCG8Q9H221 673 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 TCEAL2Q9H3H9 227 aaPredicted RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 GOLPH3Q9H4A6 298 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 MRPL40Q9NQ50 206 aaKnown RBP8.9□□□□□ -0.98
DDX39B-216ENST00000462421 UBP1Q9NZI7 540 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 LRIT1Q9P2V4 623 aa8.9□□□□□ -0.98
DDX39B-216ENST00000462421 GOLGA6L3A6NEY3 463 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 OR5K4A6NMS3 321 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 PDZK1P1A8MUH7 402 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 F5H423 210 aaPredicted RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 NUDT21O43809 227 aaKnown RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 DUX1O43812 170 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 FZD6O60353 706 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 SNX2O60749 519 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 DKK1O94907 266 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 FTCDO95954 541 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 MT-CYBP00156 380 aaPredicted RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 EPOP01588 193 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 MSH3P20585 1137 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 FECHP22830 423 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 ALDH4A1P30038 563 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 SPAM1P38567 509 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 ADCY8P40145 1251 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 INHBCP55103 352 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 DCDC1P59894 354 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 PTSQ03393 145 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 NOMO1Q15155 1222 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 AMZ1Q400G9 498 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 C3orf38Q5JPI3 329 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 PHF19Q5T6S3 580 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 CHST15Q7LFX5 561 aaPredicted RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 GSTA5Q7RTV2 222 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 LINC00523Q86TU6 105 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 PIM3Q86V86 326 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 PROSER1Q86XN7 944 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 JAMLQ86YT9 394 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 TRAPPC5Q8IUR0 188 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 DCBLD1Q8N8Z6 715 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 SPATA22Q8NHS9 363 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 WDR36Q8NI36 951 aaKnown RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 ACTL9Q8TC94 416 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 KRT35Q92764 455 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 SCAMP4Q969E2 229 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 ZNF578Q96N58 590 aaPredicted RBP8.89□□□□□ -0.99
DDX39B-216ENST00000462421 PLEKHG4BQ96PX9 1271 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 FCRL5Q96RD9 977 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 CMKLR1Q99788 373 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 FICDQ9BVA6 458 aa8.89□□□□□ -0.99
DDX39B-216ENST00000462421 FRMD8Q9BZ67 464 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms