RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 KLF1Q13351 362 aaPredicted RBP13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 CLCA4Q14CN2 919 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 SLC14A2Q15849 920 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 DPPA4Q7L190 304 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 TXLNBQ8N3L3 684 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 TP53I13Q8NBR0 393 aaPredicted RBP13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 CCDC74AQ96AQ1 378 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 PSMG3-AS1Q96PY0 264 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 EPN3Q9H201 632 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 NT5MQ9NPB1 228 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 RBM22Q9NW64 420 aaKnown RBP eCLIP13.65□□□□□ -0.223e-6■■■■■ 29.5
SCAMP4-206ENST00000460767 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 ANAPC2Q9UJX6 822 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 APPL1Q9UKG1 709 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 PCDHB11Q9Y5F2 797 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 HEY1Q9Y5J3 304 aa13.65□□□□□ -0.22
SCAMP4-206ENST00000460767 BOD1L1Q8NFC6 3051 aa13.65□□□□□ -0.23
SCAMP4-206ENST00000460767 PRAMEF33A0A0G2JMD5 474 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 MACROD2A1Z1Q3 448 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 MIF4GDA9UHW6 222 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 APOC4-APOC2K7ER74 178 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 KCNK1O00180 336 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 PRAMEF10O60809 474 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 APOC2P02655 101 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 WT1P19544 449 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 IGFALSP35858 605 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 RWDD2BP57060 319 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 PPARDQ03181 441 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 NOMO1Q15155 1222 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 ELOCQ15369 112 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 RFX6Q8HWS3 928 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 SYCE1Q8N0S2 351 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 BBS5Q8N3I7 341 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 FAM26EQ8N5C1 309 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 KYQ8NBH2 561 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 NSMCE1Q8WV22 266 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 TRIB3Q96RU7 358 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 LYSMD1Q96S90 227 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 CMKLR1Q99788 373 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 SLC12A9Q9BXP2 914 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 TDRD1Q9BXT4 1180 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 LRRN3Q9H3W5 708 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 SYNDIG1Q9H7V2 258 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 PISDQ9UG56 409 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 MAN2B2Q9Y2E5 1009 aa13.64□□□□□ -0.23
SCAMP4-206ENST00000460767 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 PPP1R12AO14974 1030 aaPredicted RBP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 JCHAINP01591 159 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 PDHA1P08559 390 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 TNNT1P13805 278 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 HGFP14210 728 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 LHCGRP22888 699 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 PTPN3P26045 913 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 CD68P34810 354 aaPredicted RBP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 HK3P52790 923 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 POLR2LP62875 67 aaKnown RBP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 CCL7P80098 99 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 DSC2Q02487 901 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 XRCC4Q13426 336 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 C1orf61Q13536 156 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 TEX44Q53QW1 395 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 LIPIQ6XZB0 460 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 BZW1Q7L1Q6 419 aaKnown RBP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 KLHDC8BQ8IXV7 354 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 SCRN2Q96FV2 425 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 IMP4Q96G21 291 aaKnown RBP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 TEKT5Q96M29 485 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 ZNF830Q96NB3 372 aaPredicted RBP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 QKIQ96PU8 341 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 C1QTNF7Q9BXJ2 289 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 OSBPL8Q9BZF1 889 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 FOXP3Q9BZS1 431 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 FOXJ2Q9P0K8 574 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 AMFRQ9UKV5 643 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
SCAMP4-206ENST00000460767 A0A0J9YYE9 177 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 HACD1B0YJ81 288 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 C9orf172C9J069 976 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 MMP20O60882 483 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 TM7SF2O76062 418 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 TRBC1P01850 177 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 PRKCGP05129 697 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 ITIH1P19827 911 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 LIG3P49916 1009 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 RPL26P61254 145 aaKnown RBP13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 DYNLT1P63172 113 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 LLGL1Q15334 1064 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 WSCD2Q2TBF2 565 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 FAXCQ5TGI0 409 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
SCAMP4-206ENST00000460767 BORAQ6PGQ7 559 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms