RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 BRINP1O60477 761 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 USP12O75317 370 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 NDST3O95803 873 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 APOC2P02655 101 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 GLB1P16278 677 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 PTPN7P35236 360 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 ADCY8P40145 1251 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 PDX1P52945 283 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.21
SHANK2-213ENST00000460048 XRCC4Q13426 336 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 NOMO1Q15155 1222 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 PCSK7Q16549 785 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 C14orf28Q4W4Y0 310 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 CERCAMQ5T4B2 595 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 KDELC1Q6UW63 502 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 TMC3Q7Z5M5 1100 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 TRIM74Q86UV6 250 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 ZNF567Q8N184 647 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 KIAA1524Q8TCG1 905 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 VAT1Q99536 393 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 HEMGNQ9BXL5 484 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 GSDMCQ9BYG8 508 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 DPEP2Q9H4A9 486 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 FAM83DQ9H4H8 585 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 SUDS3Q9H7L9 328 aaPredicted RBP16.39■□□□□ 0.21
SHANK2-213ENST00000460048 ZFYVE1Q9HBF4 777 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 APPL1Q9UKG1 709 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 TMEM98Q9Y2Y6 226 aa16.39■□□□□ 0.21
SHANK2-213ENST00000460048 LOC285095A0A1B0GVY8 99 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 A0A1W2PNU3 283 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-213ENST00000460048 A0A1W2PQM1 296 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 GRID2IPA4D2P6 1211 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 B4DGG1 531 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 INPP4BO15327 924 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 FGF1P05230 155 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 PIRTP0C851 137 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 PNLIPP16233 465 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 NFKB1P19838 968 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 AK4P27144 223 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-213ENST00000460048 NAP1L1P55209 391 aaKnown RBP16.38■□□□□ 0.21
SHANK2-213ENST00000460048 CTBSQ01459 385 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 SPIDRQ14159 915 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 PYCR3Q53H96 274 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 SNIP1Q8TAD8 396 aaKnown RBP16.38■□□□□ 0.21
SHANK2-213ENST00000460048 HTR3CQ8WXA8 447 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 OR2M4Q96R27 311 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 FCRL5Q96RD9 977 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 UBP1Q9NZI7 540 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 TAAR2Q9P1P5 351 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 VPS18Q9P253 973 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 NFKBIL1Q9UBC1 381 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-213ENST00000460048 FAM153AQ9UHL3 310 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 SHOC2Q9UQ13 582 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 ZNF711Q9Y462 761 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 OAS3Q9Y6K5 1087 aaKnown RBP16.38■□□□□ 0.21
SHANK2-213ENST00000460048 LAMA5O15230 3695 aa16.38■□□□□ 0.21
SHANK2-213ENST00000460048 ZNF106Q9H2Y7 1883 aaKnown RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 DSPP15924 2871 aaKnown RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 A0A0U1RQJ8 604 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 NUDT21O43809 227 aaKnown RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 DNAJC6O75061 913 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 PMPCBO75439 489 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 DXOO77932 396 aaKnown RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 MPOP05164 745 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 EIF2S3P41091 472 aaKnown RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 LSSP48449 732 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 RWDD2BP57060 319 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 DCDC1P59894 354 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 GABREP78334 506 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 CCL7P80098 99 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 TBC1D25Q3MII6 688 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 PID1Q7Z2X4 250 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 KIAA1328Q86T90 577 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 GPR26Q8NDV2 337 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 ZDHHC1Q8WTX9 485 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 ALG3Q92685 438 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 ATXN7L3BQ96GX2 97 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 SRPK1Q96SB4 655 aaKnown RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 OSBPL8Q9BZF1 889 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 CDH19Q9H159 772 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 LRRN3Q9H3W5 708 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 POLR1BQ9H9Y6 1135 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 KLHL8Q9P2G9 620 aaPredicted RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 LRIT1Q9P2V4 623 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 PLEKHM1Q9Y4G2 1056 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 PCYT1BQ9Y5K3 369 aaPredicted RBP16.37■□□□□ 0.21
SHANK2-213ENST00000460048 RNF215Q9Y6U7 377 aa16.37■□□□□ 0.21
SHANK2-213ENST00000460048 EPOP01588 193 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 ATP1A1P05023 1023 aaKnown RBP16.36■□□□□ 0.21
SHANK2-213ENST00000460048 RPLP0P05388 317 aaKnown RBP16.36■□□□□ 0.21
SHANK2-213ENST00000460048 RBL1P28749 1068 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 ACTN2P35609 894 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 WNT3AP56704 352 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 OTUD4Q01804 1114 aaKnown RBP16.36■□□□□ 0.21
SHANK2-213ENST00000460048 CCDC70Q6NSX1 233 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 AADACL2Q6P093 401 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 SLC30A9Q6PML9 568 aa16.36■□□□□ 0.21
SHANK2-213ENST00000460048 C19orf48Q6RUI8 117 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms