RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 HAUS1Q96CS2 278 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 SRPK1Q96SB4 655 aaKnown RBP16.03■□□□□ 0.16
COL7A1-203ENST00000459756 CDH19Q9H159 772 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 SUDS3Q9H7L9 328 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-203ENST00000459756 RAD18Q9NS91 495 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 KLHL8Q9P2G9 620 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-203ENST00000459756 COL27A1Q8IZC6 1860 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-203ENST00000459756 GRID2IPA4D2P6 1211 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 GOLGA6L6A8MZA4 724 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 NTN3O00634 580 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-203ENST00000459756 NOBOXO60393 691 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 BRINP1O60477 761 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 PNLIPP16233 465 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 GLB1P16278 677 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 CD68P34810 354 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-203ENST00000459756 PTPN7P35236 360 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 ADCY8P40145 1251 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 CETN2P41208 172 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 RWDD2BP57060 319 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 KIF5AQ12840 1032 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 TRIM74Q86UV6 250 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 NRROSQ86YC3 692 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 PTCD2Q8WV60 388 aaKnown RBP16.02■□□□□ 0.16
COL7A1-203ENST00000459756 WDR24Q96S15 920 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 FERMT1Q9BQL6 677 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 OSBPL8Q9BZF1 889 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 SPATS2LQ9NUQ6 558 aaKnown RBP16.02■□□□□ 0.16
COL7A1-203ENST00000459756 TAAR2Q9P1P5 351 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 VPS18Q9P253 973 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 FAM153AQ9UHL3 310 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 APPL1Q9UKG1 709 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 TRHDEQ9UKU6 1024 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 TMEM98Q9Y2Y6 226 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 ZNF711Q9Y462 761 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 GPSM3Q9Y4H4 160 aa16.02■□□□□ 0.16
COL7A1-203ENST00000459756 URB1O60287 2271 aaKnown RBP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 INPP4BO15327 924 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 NUDT21O43809 227 aaKnown RBP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 EPOP01588 193 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 NFKB1P19838 968 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 ACTN2P35609 894 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 TNNT3P45378 269 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 LSSP48449 732 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 DCDC1P59894 354 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 CTBSQ01459 385 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 HLTFQ14527 1009 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 NOMO1Q15155 1222 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 PID1Q7Z2X4 250 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 TMC3Q7Z5M5 1100 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 GALNT13Q8IUC8 556 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 SYCE1Q8N0S2 351 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 LSMEM2Q8N112 164 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 ZNF567Q8N184 647 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 EID2BQ96D98 161 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 OR2M4Q96R27 311 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 FCRL5Q96RD9 977 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 GPR63Q9BZJ6 419 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 SYNDIG1Q9H7V2 258 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 POLR1BQ9H9Y6 1135 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 UBP1Q9NZI7 540 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 NFKBIL1Q9UBC1 381 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 RABGEF1Q9UJ41 708 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 CNOT6Q9ULM6 557 aaKnown RBP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 SHOC2Q9UQ13 582 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 ITPR1Q14643 2758 aa16.01■□□□□ 0.15
COL7A1-203ENST00000459756 ARHGEF17Q96PE2 2063 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-203ENST00000459756 A0A087WV48 116 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 LOC285095A0A1B0GVY8 99 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 FADS2P1A8MWK0 482 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 H7C0C1 242 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 DXOO77932 396 aaKnown RBP16■□□□□ 0.15
COL7A1-203ENST00000459756 ASMTLO95671 621 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 FGF1P05230 155 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 PIRTP0C851 137 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 AK4P27144 223 aaPredicted RBP16■□□□□ 0.15
COL7A1-203ENST00000459756 ATP5OP48047 213 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 WNT3AP56704 352 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 GABREP78334 506 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 CCL7P80098 99 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 LRP8Q14114 963 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 PYCR3Q53H96 274 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 SLC30A9Q6PML9 568 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 KDELC1Q6UW63 502 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 MARK2Q7KZI7 788 aaKnown RBP16■□□□□ 0.15
COL7A1-203ENST00000459756 PEX26Q7Z412 305 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 C17orf82Q86X59 251 aaPredicted RBP16■□□□□ 0.15
COL7A1-203ENST00000459756 CCNJLQ8IV13 435 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 SFTPA2Q8IWL1 248 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 SNIP1Q8TAD8 396 aaKnown RBP16■□□□□ 0.15
COL7A1-203ENST00000459756 ACTL9Q8TC94 416 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 ZDHHC1Q8WTX9 485 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 ALG3Q92685 438 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 FGF11Q92914 225 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 ATXN7L3BQ96GX2 97 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 GFM1Q96RP9 751 aaKnown RBP16■□□□□ 0.15
COL7A1-203ENST00000459756 DESI2Q9BSY9 194 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 ZSCAN5AQ9BUG6 496 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 LRRN3Q9H3W5 708 aa16■□□□□ 0.15
COL7A1-203ENST00000459756 RMI1Q9H9A7 625 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms