RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 Q6ZSN1 163 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CHST3Q7LGC8 479 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 EFL1Q7Z2Z2 1120 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 PXKQ7Z7A4 578 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ARMC8Q8IUR7 673 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CNTN4Q8IWV2 1026 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FAM217AQ8IXS0 508 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 DDIASQ8IXT1 998 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ZNF679Q8IYX0 411 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ADSSL1Q8N142 457 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 RASGEF1CQ8N431 466 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 MAB21L3Q8N8X9 362 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 TDRD5Q8NAT2 981 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 GSTCDQ8NEC7 633 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 AKR7LQ8NHP1 331 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 LRRC8CQ8TDW0 803 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FBXO32Q969P5 355 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FBXW5Q969U6 566 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CIDECQ96AQ7 238 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 KTI12Q96EK9 354 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 PGM2Q96G03 612 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ZBED3Q96IU2 234 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 PDLIM2Q96JY6 352 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 MAGEB10Q96LZ2 347 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 CCDC42Q96M95 316 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 GDAP1L1Q96MZ0 367 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FCRL4Q96PJ5 515 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 AGAP2Q99490 1192 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 P2RX7Q99572 595 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 SLC29A1Q99808 456 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ORAI3Q9BRQ5 295 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 EDEM2Q9BV94 578 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 TBC1D10AQ9BXI6 508 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 TRIM54Q9BYV2 358 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FTOQ9C0B1 505 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD2Q9GZV1 360 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 THAP2Q9H0W7 228 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 HIPK3Q9H422 1215 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PCDH9Q9HC56 1237 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 TMEM8AQ9HCN3 771 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PALMDQ9NP74 551 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 SAYSD1Q9NPB0 183 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CNGB3Q9NQW8 809 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 TBC1D13Q9NVG8 400 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 TRIM10Q9UDY6 481 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 AFF4Q9UHB7 1163 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 MRPS2Q9Y399 296 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 CRYBG1Q9Y4K1 1723 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PIAS3Q9Y6X2 628 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FRMPD4Q14CM0 1322 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FAM205AQ6ZU69 1335 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 KIF1AQ12756 1690 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 IBTKQ9P2D0 1353 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 PLEKHH1Q9ULM0 1364 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 TRPM3Q9HCF6 1732 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 MFSD2BA6NFX1 497 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 KPNA7A9QM74 516 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 MATN2O00339 956 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 DNM1LO00429 736 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 FPGTO14772 594 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CHUKO15111 745 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 FOXP2O15409 715 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 MED7O43513 233 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 VEGFDO43915 354 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 GCATO75600 419 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 IL6P05231 212 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 LIPFP07098 398 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 IGFBP1P08833 259 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 SNRPAP09012 282 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 ARP10275 920 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CYP19A1P11511 503 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 LAMP2P13473 410 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 APEHP13798 732 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 SELLP14151 372 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PDE6AP16499 860 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 KRT15P19012 456 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 M6PRP20645 277 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CYP2B6P20813 491 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CPN2P22792 545 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SP100P23497 879 aaPredicted RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 AOAHP28039 575 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PSMA5P28066 241 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 CRABP2P29373 138 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SERPINB6P35237 376 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 RPS19P39019 145 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 PCYT1AP49585 367 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ADCY7P51828 1080 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 AGFG1P52594 562 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 METAP1P53582 386 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 ADKP55263 362 aaKnown RBP5.43□□□□□ -1.54
VPS41-209ENST00000457055 DGCR2P98153 550 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 PMP22Q01453 160 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 GCNT1Q02742 428 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SCN1BQ07699 218 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 SLFN5Q08AF3 891 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 TEFQ10587 303 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 FADDQ13158 208 aa5.43□□□□□ -1.54
VPS41-209ENST00000457055 DUSP8Q13202 625 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms