RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 PKD2L2Q9NZM6 624 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 IL17CQ9P0M4 197 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 CD84Q9UIB8 345 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 FNDC3AQ9Y2H6 1198 aaKnown RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 UNC13CQ8NB66 2214 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 A0A1B0GTQ1 180 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 DFNA5O60443 496 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 CER1O95813 267 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 APRTP07741 180 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 ZNF883P0CG24 379 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 TSHRP16473 764 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 TPH1P17752 444 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 MAGEA6P43360 314 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 ATXN3P54252 364 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 EIF2B5Q13144 721 aaKnown RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 PTPRCAPQ14761 206 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 TAF1AQ15573 450 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 HENMT1Q5T8I9 393 aaKnown RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 LINC00523Q86TU6 105 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 OR52K1Q8NGK4 314 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 GRK7Q8WTQ7 553 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 CDH19Q9H159 772 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 BPIFA1Q9NP55 256 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 CASS4Q9NQ75 786 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 EIF2B3Q9NR50 452 aaKnown RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 NFKBIL1Q9UBC1 381 aaPredicted RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 KLF15Q9UIH9 416 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 CNOT6Q9ULM6 557 aaKnown RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 OR1A2Q9Y585 309 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 KCTD3Q9Y597 815 aa10.01□□□□□ -0.81
ATG4A-206ENST00000457035 ZNF106Q9H2Y7 1883 aaKnown RBP10.01□□□□□ -0.81
ATG4A-206ENST00000457035 CACNA1BQ00975 2339 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 TCRBV7S3A2A0A539 114 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 TMEM202A6NGA9 273 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 E7EVH7 732 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 CCDC188H7C350 402 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 LDB2O43679 373 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 BUD23O43709 281 aaKnown RBP10□□□□□ -0.81
ATG4A-206ENST00000457035 FUCA1P04066 466 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 CSF2P04141 144 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 CD59P13987 128 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 LPOP22079 712 aaPredicted RBP10□□□□□ -0.81
ATG4A-206ENST00000457035 PSMA3P25788 255 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 IVDP26440 423 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 GPR1P46091 355 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 VPS41P49754 854 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 THOP1P52888 689 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 KIAA1024LP59773 190 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 DCDC1P59894 354 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 BASP1P80723 227 aaKnown RBP10□□□□□ -0.81
ATG4A-206ENST00000457035 CDK16Q00536 496 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 CDH17Q12864 832 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 BNIP3Q12983 259 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 GPS1Q13098 491 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 SLC14A1Q13336 389 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 PTK2BQ14289 1009 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 KCNJ11Q14654 390 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 NFATC4Q14934 902 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 ZNF542PQ5EBM4 170 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 RAET1GQ6H3X3 334 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 ADAMTSL4Q6UY14 1074 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 MACC1Q6ZN28 852 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 GLT6D1Q7Z4J2 308 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 SPATA4Q8NEY3 305 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 DTX3LQ8TDB6 740 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 LRRC45Q96CN5 670 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 COX14Q96I36 57 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 C19orf43Q9BQ61 176 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 IL26Q9NPH9 171 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 RAD18Q9NS91 495 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 TM7SF3Q9NS93 570 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 PIH1D1Q9NWS0 290 aaKnown RBP10□□□□□ -0.81
ATG4A-206ENST00000457035 CDC23Q9UJX2 597 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 PCDHGB2Q9Y5G2 931 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 ARL5AQ9Y689 179 aa10□□□□□ -0.81
ATG4A-206ENST00000457035 MROH6A6NGR9 719 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 C2orf81A6NN90 581 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 FADS2P1A8MWK0 482 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 KIF2AO00139 706 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-206ENST00000457035 CACNB4O00305 520 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-206ENST00000457035 GAPDHSO14556 408 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-206ENST00000457035 TNFRSF10CO14798 259 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 STX7O15400 261 aaKnown RBP9.99□□□□□ -0.81
ATG4A-206ENST00000457035 PCDHGA12O60330 932 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 PPFIA2O75334 1257 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 ECEL1O95672 775 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 CRTAMO95727 393 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 GAS8O95995 478 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 SLC4A1P02730 911 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 CEACAM5P06731 702 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 PYGLP06737 847 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
ATG4A-206ENST00000457035 TPSB2P20231 275 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 HTR1BP28222 390 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 LMAN1P49257 510 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 ARRB1P49407 418 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-206ENST00000457035 CDK3Q00526 305 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 TPSAB1Q15661 275 aa9.99□□□□□ -0.81
ATG4A-206ENST00000457035 ST3GAL2Q16842 350 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms