RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 NEK5Q6P3R8 708 aa13.18□□□□□ -0.3
SMARCA4-205ENST00000450717 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
SMARCA4-205ENST00000450717 RAVER1Q8IY67 606 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-205ENST00000450717 ZNF671Q8TAW3 534 aa13.18□□□□□ -0.3
SMARCA4-205ENST00000450717 GPR152Q8TDT2 470 aa13.18□□□□□ -0.3
SMARCA4-205ENST00000450717 IGSF9Q9P2J2 1179 aa13.18□□□□□ -0.3
SMARCA4-205ENST00000450717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ADH1CP00326 375 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 DUSP4Q13115 394 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CAPN13Q6MZZ7 669 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 KRT74Q7RTS7 529 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ZHX1-C8orf76Q96EF9 292 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 LRTM1Q9HBL6 345 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CLIC5Q9NZA1 410 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ADGRE2Q9UHX3 823 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ZNF490Q9ULM2 529 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 IRGMA1A4Y4 181 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SNPHO15079 494 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ZNF37AP17032 561 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CCL23P55773 120 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CACUL1Q86Y37 369 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 LEMD2Q8NC56 503 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 UBASH3BQ8TF42 649 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 DGCR14Q96DF8 476 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 RHBGQ9H310 441 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 DNAJC11Q9NVH1 559 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 GPSM3Q9Y4H4 160 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 NPHS1O60500 1241 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 TCEA3O75764 348 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 HIST1H2ABP04908 130 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ZNF24P17028 368 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 LAG3P18627 525 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SPAM1P38567 509 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 NR1D2Q14995 579 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CCDC157Q569K6 752 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CPTPQ5TA50 214 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CES5AQ6NT32 575 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 HIST3H2AQ7L7L0 130 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 FAM220AQ7Z4H9 259 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CFAP52Q8N1V2 620 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 BANPQ8N9N5 519 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 HIST1H2ACQ93077 130 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 MAGEH1Q9H213 219 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SCAMP3O14828 347 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 LRIG2O94898 1065 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 PIGRP01833 764 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 GABRR2P28476 465 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 PBX3P40426 434 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 BIKQ13323 160 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 FZD8Q9H461 694 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SLC22A2O15244 555 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 TREHO43280 583 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 IL1BP01584 269 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ASMTP46597 345 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 CCR4P51679 360 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SEMA5AQ13591 1074 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 TSTD2Q5T7W7 516 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 ANKS1BQ7Z6G8 1248 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 HPS6Q86YV9 775 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 RTL3Q8N8U3 475 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 SLCO2A1Q92959 643 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 COL26A1Q96A83 441 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
SMARCA4-205ENST00000450717 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 AP3D1O14617 1153 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 OR10H3O60404 316 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 SLC26A3P40879 764 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 LCP2Q13094 533 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 MTX3Q5HYI7 312 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 GPR158Q5T848 1215 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 CHSY3Q70JA7 882 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 NDRG1Q92597 394 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 RERGQ96A58 199 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 DPEP3Q9H4B8 488 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 PNPLA8Q9NP80 782 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 DUSP11O75319 330 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 LRATO95237 230 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 SELPP16109 830 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 TAF13Q15543 124 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 ARL13AQ5H913 290 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 TEX47Q8TBZ9 253 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 ROPN1LQ96C74 230 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 MCRS1Q96EZ8 462 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 S100A13Q99584 98 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 RACGAP1Q9H0H5 632 aa13.16□□□□□ -0.3
SMARCA4-205ENST00000450717 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms