RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 SNAPC1Q16533 368 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 POM121L1PQ3SYA9 428 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 PDSS1Q5T2R2 415 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 NXPE2Q96DL1 559 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 FBXO6Q9NRD1 293 aaPredicted RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 ERVW-1Q9UQF0 538 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 SLC37A4O43826 429 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 TLL1O43897 1013 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 TRUB2O95900 331 aaKnown RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 GLUD1P00367 558 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 UROSP10746 265 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 PVALBP20472 110 aaPredicted RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 MC1RQ01726 317 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 ILF3Q12906 894 aaKnown RBP eCLIP8.28□□□□□ -1.081e-6■■■□□ 15
LPP-208ENST00000448637 SGCBQ16585 318 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 TYSND1Q2T9J0 566 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 NOMO2Q5JPE7 1267 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 PERM1Q5SV97 790 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 FNBP1LQ5T0N5 605 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 POTEHQ6S545 545 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 AKAP14Q86UN6 197 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 SAMD14Q8IZD0 417 aaPredicted RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 C17orf50Q8WW18 174 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 SLC38A4Q969I6 547 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 COQ8BQ96D53 544 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 OSBPL11Q9BXB4 747 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 MED28Q9H204 178 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 EHD1Q9H4M9 534 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 RNPEPL1Q9HAU8 725 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 SERINC1Q9NRX5 453 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 NINJ2Q9NZG7 142 aa8.28□□□□□ -1.08
LPP-208ENST00000448637 IFT80Q9P2H3 777 aaPredicted RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 AGO1Q9UL18 857 aaKnown RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 RPL26L1Q9UNX3 145 aaKnown RBP8.28□□□□□ -1.08
LPP-208ENST00000448637 TEX13CA0A0J9YWL9 993 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 SLC30A4O14863 429 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 PER2O15055 1255 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 NFATC1O95644 943 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 FGF1P05230 155 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 NR2C1P13056 603 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 ATF6P18850 670 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 RAB10P61026 200 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 LSM3P62310 102 aaKnown RBP8.27□□□□□ -1.08
LPP-208ENST00000448637 PPP3CAQ08209 521 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 SMARCB1Q12824 385 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 UBE2R2Q712K3 238 aaPredicted RBP8.27□□□□□ -1.08
LPP-208ENST00000448637 NIPA1Q7RTP0 329 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 SYVN1Q86TM6 617 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 ARMC10Q8N2F6 343 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 SLC43A3Q8NBI5 491 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 PIGXQ8TBF5 258 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 DCAKDQ8WVC6 231 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 HSFY1Q96LI6 401 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 TM6SF2Q9BZW4 377 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 MED31Q9Y3C7 131 aa8.27□□□□□ -1.08
LPP-208ENST00000448637 MYPNQ86TC9 1320 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ARHGEF40Q8TER5 1519 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 TRIM64BA6NI03 449 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ANXA2P2A6NMY6 339 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 BBIP1A8MTZ0 92 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 CAPN14A8MX76 684 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 CAPN15O75808 1086 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 TRBC1P01850 177 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ERBB2P04626 1255 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ANXA2P07355 339 aaKnown RBP8.27□□□□□ -1.09
LPP-208ENST00000448637 FAM153BP0C7A2 387 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 SRCP12931 536 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 MIPP30301 263 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 RBM34P42696 430 aaKnown RBP8.27□□□□□ -1.09
LPP-208ENST00000448637 ZNF234Q14588 700 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 LY6KQ17RY6 165 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ARCQ7LC44 396 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 GALNT13Q8IUC8 556 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 RIOX2Q8IUF8 465 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 LIX1Q8N485 282 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
LPP-208ENST00000448637 HM13Q8TCT9 377 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ACMSDQ8TDX5 336 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 OVCA2Q8WZ82 227 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ZSWIM3Q96MP5 696 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 MYOCQ99972 504 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 BPIFA1Q9NP55 256 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 GDF3Q9NR23 364 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 R3HDM2Q9Y2K5 976 aaKnown RBP8.27□□□□□ -1.09
LPP-208ENST00000448637 M0R129 80 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 AZIN1O14977 448 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 PAPSS2O95340 614 aaPredicted RBP8.27□□□□□ -1.09
LPP-208ENST00000448637 COX4I1P13073 169 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 CCNB1P14635 433 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 GNSP15586 552 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ZNF20P17024 532 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 RBL1P28749 1068 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ALDH4A1P30038 563 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 PNLIPRP1P54315 467 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 PITPNAQ00169 270 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 GRSF1Q12849 480 aaKnown RBP eCLIP8.27□□□□□ -1.09
LPP-208ENST00000448637 RAB39AQ14964 217 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 MINDY4Q4G0A6 757 aa8.27□□□□□ -1.09
LPP-208ENST00000448637 ZC3H12AQ5D1E8 599 aaKnown RBP8.27□□□□□ -1.09
LPP-208ENST00000448637 ZNF34Q8IZ26 560 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms