RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	NR2E3	Q9Y5X4	410 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	SCN10A	Q9Y5Y9	1956 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	PSAT1	Q9Y617	370 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	TRIP11	Q15643	1979 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995		A0A1W2PQH9	124 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZC3H12D	A2A288	527 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TRPC5OS	A6NMA1	111 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	VGLL3	A8MV65	326 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	FADS2P1	A8MWK0	482 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PRR5-ARHGAP8	B1AHC4	643 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995		E9PAM4	449 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995		H7C4K7	107 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995		I6L893	689 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	HDAC3	O15379	428 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	NVL	O15381	856 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	NPHS1	O60500	1241 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	MAFK	O60675	156 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	USP12	O75317	370 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ENTPD5	O75356	428 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PMPCB	O75439	489 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TADA2A	O75478	443 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	LYPLA1	O75608	230 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PRAMEF1	O95521	474 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	MOCS2	O96007	188 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	GSR	P00390	522 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	HLA-DQB2	P05538	268 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SYP	P08247	313 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RBP1	P09455	135 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	THRA	P10827	490 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ACADS	P16219	412 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TPH1	P17752	444 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	GNAZ	P19086	355 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ATP6V1C1	P21283	382 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	IBSP	P21815	317 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	VAMP1	P23763	118 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ATP5F1	P24539	256 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	YY1	P25490	414 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	YWHAQ	P27348	245 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	NMBR	P28336	390 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ADRA1A	P35348	466 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SLC26A3	P40879	764 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PTDSS1	P48651	473 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	MAPKAPK2	P49137	400 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SERPINH1	P50454	418 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RPL14	P50914	215 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ACLY	P53396	1101 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	MLLT6	P55198	1093 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	WNT3A	P56704	352 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TBX4	P57082	545 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PCBP3	P57721	371 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	YBEY	P58557	167 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	DNAJB13	P59910	316 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RAB10	P61026	200 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ACTR3	P61158	418 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	FAM189B	P81408	668 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	MRPS35	P82673	323 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ARHGAP8	P85298	464 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	KDSR	Q06136	332 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CACNB2	Q08289	660 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	DSC1	Q08554	894 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	EFEMP1	Q12805	493 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	BFSP2	Q13515	415 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	GRM3	Q14832	879 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	KPNB1	Q14974	876 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	NAA25	Q14CX7	972 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RCN1	Q15293	331 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	FAM83E	Q2M2I3	478 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PARP15	Q460N3	678 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ACCSL	Q4AC99	568 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PAN2	Q504Q3	1202 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RABGAP1L	Q5R372	815 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SH2D4B	Q5SQS7	431 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	MARC1	Q5VT66	337 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	AGAP9	Q5VTM2	703 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	C1orf146	Q5VVC0	180 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	LRRC8E	Q6NSJ5	796 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	NEPRO	Q6NW34	567 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CNKSR3	Q6P9H4	555 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	EPGN	Q6UW88	154 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CES3	Q6UWW8	571 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CD300LG	Q6UXG3	332 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RINL	Q6ZS11	566 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	OTOP3	Q7RTS5	596 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CMC1	Q7Z7K0	106 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SCD5	Q86SK9	330 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	LRRTM3	Q86VH5	581 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	ULK2	Q8IYT8	1036 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	CNTD1	Q8N815	330 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TDRD5	Q8NAT2	981 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	NETO2	Q8NC67	525 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	RBM15B	Q8NDT2	890 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	OR6Y1	Q8NGX8	325 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SCAMP5	Q8TAC9	235 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	TTC8	Q8TAM2	541 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	SPPL2B	Q8TCT7	592 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	USP33	Q8TEY7	942 aa		4.07	□□□□□ -1.76
PTPN12-208	ENST00000447995	HASPIN	Q8TF76	798 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms