RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LPOP22079 712 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 RPL22P35268 128 aaKnown RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 KCNJ1P48048 391 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 LMAN1P49257 510 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 MSLNQ13421 630 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 SEMA5AQ13591 1074 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 SPARCL1Q14515 664 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 HID1Q8IV36 788 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 GPR26Q8NDV2 337 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 OR4C6Q8NH72 309 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 LMX1AQ8TE12 382 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 TSACCQ96A04 125 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 MAGOHBQ96A72 148 aaKnown RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 AGAP2Q99490 1192 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 LRRC61Q9BV99 259 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 SPATA16Q9BXB7 569 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 AP1M1Q9BXS5 423 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 FGF22Q9HCT0 170 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 RAB6BQ9NRW1 208 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 UCKL1Q9NWZ5 548 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 IL17CQ9P0M4 197 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 FTSJ1Q9UET6 329 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 PRSS38A1L453 326 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 LMO7DNF2Z398 122 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 GIPC1O14908 333 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 ZNF185O15231 689 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 PHF2O75151 1096 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 GAS8O95995 478 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 CEACAM5P06731 702 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 IVLP07476 585 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 ZSCAN5DPP0CG00 497 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 GIMD1P0DJR0 217 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 ETS1P14921 441 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 SPAM1P38567 509 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 SIM1P81133 766 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 OLIG2Q13516 323 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 ELOCQ15369 112 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 PRRT3Q5FWE3 981 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 ALS2CLQ60I27 953 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 RD3Q7Z3Z2 195 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 RBFAQ8N0V3 343 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 TAB3Q8N5C8 712 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 FAM181AQ8N9Y4 354 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 GLIS1Q8NBF1 620 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 PDXPQ96GD0 296 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 SCARF2Q96GP6 870 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 CNDP2Q96KP4 475 aaKnown RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 EIF2B3Q9NR50 452 aaKnown RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 NCKIPSDQ9NZQ3 722 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 VPS18Q9P253 973 aa11.74□□□□□ -0.53
HSPG2-206ENST00000439717 CNOT6Q9ULM6 557 aaKnown RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-206ENST00000439717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 FADS2P1A8MWK0 482 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 AP3B1O00203 1094 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 TRIM38O00635 465 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 INPP4BO15327 924 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 FFAR2O15552 330 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 ANXA6P08133 673 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 KCNA4P22459 653 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 HADHAP40939 763 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 FNTAP49354 379 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 CDH17Q12864 832 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 LAMB3Q13751 1172 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 ITGA9Q13797 1035 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 PROX2Q3B8N5 592 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 ZCCHC8Q6NZY4 707 aaKnown RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 TTC27Q6P3X3 843 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 CCDC137Q6PK04 289 aaKnown RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 PRUNE1Q86TP1 453 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 GKN2Q86XP6 184 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 KNL1Q8NG31 2342 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 GRK7Q8WTQ7 553 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 SCG3Q8WXD2 468 aaKnown RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 GLYATL1Q969I3 302 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 VPS35Q96QK1 796 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 CLPBQ9H078 707 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 SPTBN4Q9H254 2564 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 CAAP1Q9H8G2 361 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 CARS2Q9HA77 564 aaKnown RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 CYP4F12Q9HCS2 524 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 BPIFA1Q9NP55 256 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 IL26Q9NPH9 171 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 MRPL40Q9NQ50 206 aaKnown RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 EVA1BQ9NVM1 165 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 TRNAU1APQ9NX07 287 aaKnown RBP11.73□□□□□ -0.53
HSPG2-206ENST00000439717 SMARCAL1Q9NZC9 954 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 RNF14Q9UBS8 474 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 MOSPD1Q9UJG1 213 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 SUFUQ9UMX1 484 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 DOLKQ9UPQ8 538 aa11.73□□□□□ -0.53
HSPG2-206ENST00000439717 APOBEC2Q9Y235 224 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms