RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 TRAF2Q12933 501 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 C2orf68Q2NKX9 166 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 PRTGQ2VWP7 1150 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 DAB2IPQ5VWQ8 1189 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 Q6ZTK2 550 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 TAOK1Q7L7X3 1001 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 CCDC186Q7Z3E2 898 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 TSPAN33Q86UF1 283 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 CCDC190Q86UF4 302 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 VSIG1Q86XK7 387 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 SCYL3Q8IZE3 742 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 IL17RCQ8NAC3 791 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 MIGA1Q8NAN2 632 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 CSNK2A3Q8NEV1 391 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 SLC25A28Q96A46 364 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 TMCO6Q96DC7 493 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 CEP295NLQ96MC4 621 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZMAT2Q96NC0 199 aaKnown RBP4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 CRAMP1Q96RY5 1269 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 GAD1Q99259 594 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 CCDC106Q9BWC9 280 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 MMP27Q9H306 513 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 DENND2DQ9H6A0 471 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 PPP1R3EQ9H7J1 279 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 DDX4Q9NQI0 724 aaKnown RBP4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 ACSS1Q9NUB1 689 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 HEY2Q9UBP5 337 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 STK39Q9UEW8 545 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 TRPV2Q9Y5S1 764 aa4.57□□□□□ -1.68
HMGB1P45-201ENST00000435986 H0YGN5 161 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 CLGNO14967 610 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ATP2A1O14983 1001 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 SMAD9O15198 467 aaKnown RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ADAM20O43506 726 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 GH2P01242 217 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 CDC25AP30304 524 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 NUDT6P53370 316 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 TMF1P82094 1093 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ECT2LQ008S8 904 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 DSC1Q08554 894 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 KYNUQ16719 465 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 MMEL1Q495T6 779 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZNF805Q5CZA5 627 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 EFHC1Q5JVL4 640 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 C1orf141Q5JVX7 400 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 LRIF1Q5T3J3 769 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ERMARDQ5T6L9 678 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ADALQ6DHV7 355 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 TYW3Q6IPR3 259 aaKnown RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 RPUSD3Q6P087 351 aaKnown RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 MTSS1LQ765P7 747 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 SDCCAG8Q86SQ7 713 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 HJURPQ8NCD3 748 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ARRDC2Q8TBH0 407 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 SECISBP2LQ93073 1101 aaKnown RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 RPL36ALQ969Q0 106 aaKnown RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZNF622Q969S3 477 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ERGIC1Q969X5 290 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 PTERQ96BW5 349 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 RMDN1Q96DB5 314 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 DACH2Q96NX9 599 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 RAB3IPQ96QF0 476 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 SMC6Q96SB8 1091 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 PAFAH2Q99487 392 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 DNAJC18Q9H819 358 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZWILCHQ9H900 591 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 SH3GLB2Q9NR46 395 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 DDX25Q9UHL0 483 aaKnown RBP4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 FZD10Q9ULW2 581 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 CDC14AQ9UNH5 594 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 BTBD3Q9Y2F9 522 aa4.56□□□□□ -1.68
HMGB1P45-201ENST00000435986 CKAP5Q14008 2032 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 CPED1A4D0V7 1026 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 GOLGA6L9A6NEM1 432 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 EIF4E1BA6NMX2 242 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 M0QZ24 198 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 SPINT2O43291 252 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 LDB2O43679 373 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 EPN2O95208 641 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 QDPRP09417 244 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 CCDC175P0C221 793 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 MMP9P14780 707 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 ACADLP28330 430 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 HOXD3P31249 432 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 HNRNPH1P31943 449 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 FASLGP48023 281 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 ROR2Q01974 943 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 GRAPQ13588 217 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 SNTB1Q13884 538 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 TWIST1Q15672 202 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 SMN1Q16637 294 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 MYLK3Q32MK0 819 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 ALDH1L2Q3SY69 923 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZNF626Q68DY1 528 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZNF367Q7RTV3 350 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 ZC3HC1Q86WB0 502 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 LINC00346Q8IVM7 164 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 DNAJC10Q8IXB1 793 aa4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 GUF1Q8N442 669 aaKnown RBP4.55□□□□□ -1.68
HMGB1P45-201ENST00000435986 OR1J2Q8NGS2 313 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms