RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SPAG4Q9NPE6 437 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 MARCH2Q9P0N8 246 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 BTRCQ9Y297 605 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC12A8A0AV02 714 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 C8BP07358 591 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 ZNF37AP17032 561 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 GPX3P22352 226 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 RGRP47804 291 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 FLT3LGP49771 235 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 RHDQ02161 417 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 PTPRRQ15256 657 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 NADK2Q4G0N4 442 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 C8orf82Q6P1X6 216 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC22A9Q8IVM8 553 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 COLGALT2Q8IYK4 626 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 TRIML2Q8N7C3 387 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 FBXO32Q969P5 355 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 FAR2Q96K12 515 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 UPF3AQ9H1J1 476 aaKnown RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 MID1IP1Q9NPA3 183 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 TMEM181Q9P2C4 612 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 MAP10Q9P2G4 905 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 FAM50BQ9Y247 325 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 MED16Q9Y2X0 877 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 HEMK1Q9Y5R4 338 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SNX13Q9Y5W8 968 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 VILLO15195 856 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CKMT2P17540 419 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 RXRGP48443 463 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 RPL26P61254 145 aaKnown RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 GALNT1Q10472 559 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 VPS26BQ4G0F5 336 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SETMARQ53H47 684 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 BTN2A3PQ96KV6 586 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 RPL10LQ96L21 214 aaKnown RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CYP2S1Q96SQ9 504 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CIB1Q99828 191 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 ARMC7Q9H6L4 198 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 GALPQ9UBC7 116 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 GREB1Q4ZG55 1949 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 ZNF839A8K0R7 811 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 NR5A2O00482 541 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 GLP2RO95838 553 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 UGT1A6P19224 532 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CAPN3P20807 821 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 ATP6V1B2P21281 511 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CD97P48960 835 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 APLP1P51693 650 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 GLB1LQ6UWU2 654 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 TMEM126BQ8IUX1 230 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SIX5Q8N196 739 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 C8orf48Q96LL4 319 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC2A11Q9BYW1 496 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 NOL11Q9H8H0 719 aaKnown RBP10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 CROTQ9UKG9 612 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 RNF11Q9Y3C5 154 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 SPO11Q9Y5K1 396 aa10.38□□□□□ -0.75
CLSTN1-203ENST00000435891 PLOD2O00469 737 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 SEPT4O43236 478 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 TIPRLO75663 272 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 VNN2O95498 520 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 PRDX3P30048 256 aaKnown RBP10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 PBX3P40426 434 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 RPL5P46777 297 aaKnown RBP10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 ACVR1Q04771 509 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 CAPRIN1Q14444 709 aaKnown RBP10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 GEN1Q17RS7 908 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 KIF19Q2TAC6 998 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 FAM45BPQ6NSW5 357 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 GALNT7Q86SF2 657 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 PHYKPLQ8IUZ5 450 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 MYO1HQ8N1T3 1032 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 OR7D4Q8NG98 312 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 FAM45AQ8TCE6 357 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 TWIST2Q8WVJ9 160 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 CANT1Q8WVQ1 401 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 ATOH8Q96SQ7 321 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 DCUN1D5Q9BTE7 237 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC25A23Q9BV35 468 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 GPR62Q9BZJ7 368 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 FBXO44Q9H4M3 255 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 BCAP29Q9UHQ4 241 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 A0A0J9YYE9 177 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 TCRBV3S1A0A5B6 114 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 MANSC4A6NHS7 340 aaPredicted RBP10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 NME4O00746 187 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 LINC00032P0C843 101 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 RPL10P27635 214 aaKnown RBP10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 GATMP50440 423 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 PLXNA3P51805 1871 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 IL10RBQ08334 325 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 IKBKEQ14164 716 aa10.37□□□□□ -0.75
CLSTN1-203ENST00000435891 MYLK3Q32MK0 819 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms