RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 AP2A1O95782 977 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 CEACAM5P06731 702 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 BPIP17213 487 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 FDFT1P37268 417 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 FAXCQ5TGI0 409 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 HID1Q8IV36 788 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 SDR16C5Q8N3Y7 309 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 PDXPQ96GD0 296 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 HIC2Q96JB3 615 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 PLEKHG4BQ96PX9 1271 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 NAP1L3Q99457 506 aaPredicted RBP18.27■□□□□ 0.52
HLA-F-220ENST00000434407 CLPBQ9H078 707 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 LRRC40Q9H9A6 602 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.52
HLA-F-220ENST00000434407 PLXNB3Q9ULL4 1909 aa18.27■□□□□ 0.51
HLA-F-220ENST00000434407 PRSS38A1L453 326 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 ERI2A8K979 691 aaKnown RBP18.26■□□□□ 0.51
HLA-F-220ENST00000434407 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 LMO7DNF2Z398 122 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 PGRMC1O00264 195 aaKnown RBP18.26■□□□□ 0.51
HLA-F-220ENST00000434407 TPP1O14773 563 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 PPFIA2O75334 1257 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 IFNB1P01574 187 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 FUCA1P04066 466 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 ETS1P14921 441 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 SIM1P81133 766 aaPredicted RBP18.26■□□□□ 0.51
HLA-F-220ENST00000434407 SPARCL1Q14515 664 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 CYP1B1Q16678 543 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 PROX2Q3B8N5 592 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 PRRT3Q5FWE3 981 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 PDPK2PQ6A1A2 396 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 GLT6D1Q7Z4J2 308 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 FSTL5Q8N475 847 aaPredicted RBP18.26■□□□□ 0.51
HLA-F-220ENST00000434407 TRAM1L1Q8N609 369 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 FAM181AQ8N9Y4 354 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 BLOC1S5Q8TDH9 187 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 LMX1AQ8TE12 382 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 C19orf43Q9BQ61 176 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 APOL2Q9BQE5 337 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 ZSCAN5AQ9BUG6 496 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 DUSP23Q9BVJ7 150 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 ETNK1Q9HBU6 452 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 PAK5Q9P286 719 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 FTSJ1Q9UET6 329 aa18.26■□□□□ 0.51
HLA-F-220ENST00000434407 CEP295Q9C0D2 2601 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 PTPRBP23467 1997 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 SIGLEC6O43699 453 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 USP12O75317 370 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 SUN1O94901 812 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 LDOC1O95751 146 aaPredicted RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 TNFP01375 233 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 IVLP07476 585 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 ADRB1P08588 477 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 RPL22P35268 128 aaKnown RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 ACTN2P35609 894 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 KCNJ1P48048 391 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 GNG11P61952 73 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 SEMA5AQ13591 1074 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 TAF1AQ15573 450 aaPredicted RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 ZDHHC20Q5W0Z9 365 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 PAPD7Q5XG87 772 aaKnown RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 C4orf22Q6V702 233 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 PRUNE1Q86TP1 453 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 PDCD7Q8N8D1 485 aaKnown RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 BRSK1Q8TDC3 778 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 LRRC45Q96CN5 670 aa18.25■□□□□ 0.51
HLA-F-220ENST00000434407 CNDP2Q96KP4 475 aaKnown RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 MRPL40Q9NQ50 206 aaKnown RBP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.25■□□□□ 0.51
HLA-F-220ENST00000434407 TPRP12270 2363 aaKnown RBP18.24■□□□□ 0.51
HLA-F-220ENST00000434407 LY6G6EA0A0G2JKS1 128 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 MED19A0JLT2 244 aaPredicted RBP18.24■□□□□ 0.51
HLA-F-220ENST00000434407 CELA2BP08218 269 aaPredicted RBP18.24■□□□□ 0.51
HLA-F-220ENST00000434407 FTH1P19P0C7X4 201 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 ALPPL2P10696 532 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 TCP1P17987 556 aaKnown RBP18.24■□□□□ 0.51
HLA-F-220ENST00000434407 C1orf61Q13536 156 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 ELOCQ15369 112 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 LVRNQ6Q4G3 990 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 SLCO6A1Q86UG4 719 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 PTCD2Q8WV60 388 aaKnown RBP18.24■□□□□ 0.51
HLA-F-220ENST00000434407 SPATA16Q9BXB7 569 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 CYP4F12Q9HCS2 524 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 BPIFA1Q9NP55 256 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 IL26Q9NPH9 171 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 VPS18Q9P253 973 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 ARL5AQ9Y689 179 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 OAS3Q9Y6K5 1087 aaKnown RBP18.24■□□□□ 0.51
HLA-F-220ENST00000434407 U3KQA8 63 aa18.24■□□□□ 0.51
HLA-F-220ENST00000434407 GAPDHSO14556 408 aaPredicted RBP18.23■□□□□ 0.51
HLA-F-220ENST00000434407 ZNF185O15231 689 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 FANCGO15287 622 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 FFAR2O15552 330 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 SLC4A1P02730 911 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 ZSCAN5DPP0CG00 497 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 CKMT2P17540 419 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 LPOP22079 712 aaPredicted RBP18.23■□□□□ 0.51
HLA-F-220ENST00000434407 FOXK2Q01167 660 aa18.23■□□□□ 0.51
HLA-F-220ENST00000434407 ALS2CLQ60I27 953 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms