RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 NR1H2P55055 460 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ADARP55265 1226 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 MRPS6P82932 125 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 ALFQ53S48 1182 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CMPK2Q5EBM0 449 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 RABL3Q5HYI8 236 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 UGT2A3Q6UWM9 527 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 C16orf59Q7L2K0 433 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 LRRTM3Q86VH5 581 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 LSMEM2Q8N112 164 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TMEM86AQ8N2M4 240 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TRPV1Q8NER1 839 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 SPPL2BQ8TCT7 592 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 DDI1Q8WTU0 396 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TWIST2Q8WVJ9 160 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 NTAN1Q96AB6 310 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ZFRQ96KR1 1074 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 TMEM74Q96NL1 305 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 SLC2A13Q96QE2 648 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 SLC9A7Q96T83 725 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MRPS26Q9BYN8 205 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 AKTIPQ9H8T0 292 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TNFRSF12AQ9NP84 129 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 GMIPQ9P107 970 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 PSME4Q14997 1843 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 BRWD1Q9NSI6 2320 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 SDK1Q7Z5N4 2213 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ENPP3O14638 875 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 FFAR3O14843 346 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 AZIN1O14977 448 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 GPR42O15529 346 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 IRAK2O43187 625 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 SYNCRIPO60506 623 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 MSL3P1P0C860 447 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ZNF24P17028 368 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ATP6V1B2P21281 511 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CCNCP24863 283 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 PRDX6P30041 224 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MYBPC1Q00872 1141 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MRPL28Q13084 256 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 GRB7Q14451 532 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 NR6A1Q15406 480 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 PTPRNQ16849 979 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TSTD2Q5T7W7 516 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 OGFRL1Q5TC84 451 aaPredicted RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 CYS1Q717R9 158 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 STK32CQ86UX6 486 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 SLC22A9Q8IVM8 553 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MFSD6LQ8IWD5 586 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 LGI2Q8N0V4 545 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 OR6K2Q8NGY2 324 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 FAM110BQ8TC76 370 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ZFAND2BQ8WV99 257 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 FAR2Q96K12 515 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 C11orf84Q9BUA3 381 aaPredicted RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 KIFC1Q9BW19 673 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 PRKD2Q9BZL6 878 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 POLR1BQ9H9Y6 1135 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 NMUR1Q9HB89 426 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 GID8Q9NWU2 228 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CNOT6Q9ULM6 557 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 PADI3Q9ULW8 664 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 COL6A3P12111 3177 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CD3EAPO15446 510 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 SEPT4O43236 478 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TRMUO75648 421 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 BCAS2O75934 225 aaPredicted RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 TMCC1O94876 653 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 GOT2P00505 430 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 F2P00734 622 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TFAP2AP05549 437 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 PABPC4LP0CB38 370 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 KCNE1P15382 129 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ACVRL1P37023 503 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CLCN5P51795 746 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 DIO3P55073 304 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CDK18Q07002 472 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 ATP1A4Q13733 1029 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 TSNQ15631 228 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 CTXN3Q4LDR2 81 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 INTS6LQ5JSJ4 861 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 GLB1LQ6UWU2 654 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 OR10T2Q8NGX3 314 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 FBXO30Q8TB52 745 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 KCTD13Q8WZ19 329 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 FIG4Q92562 907 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MTFMTQ96DP5 389 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 DTNBP1Q96EV8 351 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MRGPRX2Q96LB1 330 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 PPP1R10Q96QC0 940 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 FCRL5Q96RD9 977 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 C17orf80Q9BSJ5 609 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 HGH1Q9BTY7 390 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 CCDC28BQ9BUN5 200 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 LATS2Q9NRM7 1088 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 RRN3Q9NYV6 651 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MARCH2Q9P0N8 246 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms