RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SH3RF2Q8TEC5 729 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 GATA6Q92908 595 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 ASB9Q96DX5 294 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 LRGUKQ96M69 825 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 HERC2P3Q9BVR0 1158 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 CACNA2D2Q9NY47 1150 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 ADA2Q9NZK5 511 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 CCDC167Q9P0B6 97 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 DLGAP2Q9P1A6 1054 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 PDP2Q9P2J9 529 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 TRMT6Q9UJA5 497 aaKnown RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 MTF2Q9Y483 593 aaPredicted RBP13.63□□□□□ -0.23
THBS3-202ENST00000428962 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 MICAL3Q7RTP6 2002 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 HTTP42858 3142 aa13.63□□□□□ -0.23
THBS3-202ENST00000428962 EIF4E1BA6NMX2 242 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 ANKRD66B4E2M5 251 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 STX16-NPEPL1H3BU86 382 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 H7C0S8 307 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 STX16O14662 325 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 CDK14O94921 469 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 MBL2P11226 248 aaPredicted RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 PKMP14618 531 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 MC4RP32245 332 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 CLCN4P51793 760 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 SH3BP2P78314 561 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 IKBKEQ14164 716 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PTPRNQ16849 979 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 UGT3A2Q3SY77 523 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 SPOUT1Q5T280 376 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 LPCAT4Q643R3 524 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 ANKS6Q68DC2 871 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 UGT3A1Q6NUS8 523 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 NCEH1Q6PIU2 408 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 TET1Q8NFU7 2136 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 TWIST2Q8WVJ9 160 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.62□□□□□ -0.23
THBS3-202ENST00000428962 SPDL1Q96EA4 605 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 TMEM169Q96HH4 297 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 BTBD9Q96Q07 612 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 SPAG4Q9NPE6 437 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PACSIN3Q9UKS6 424 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 FAM50BQ9Y247 325 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PCDHGC4Q9Y5F7 938 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PCDHGA7Q9Y5G6 932 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 CARNS1A5YM72 827 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 DPPA5A6NC42 116 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 C2orf78A6NCI8 922 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PRRG1O14668 218 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 MRASO14807 208 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 TBL1XO60907 577 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 CLASP2O75122 1294 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 CRCPO75575 148 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 UQCRBP14927 111 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 TSPAN8P19075 237 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 EEF1DP29692 281 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 DPP6P42658 865 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 EPHB3P54753 998 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 CDH13P55290 713 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 RHOAP61586 193 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 MRPS22P82650 360 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 TRAF2Q12933 501 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 LRP8Q14114 963 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 KIF19Q2TAC6 998 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 GRAMD1BQ3KR37 738 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 ZRANB3Q5FWF4 1079 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 DEFB128Q7Z7B8 93 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 CARNMT1Q8N4J0 409 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PCYOX1LQ8NBM8 494 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 HMGCLL1Q8TB92 370 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 ROPN1LQ96C74 230 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 NSMCE3Q96MG7 304 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 ZNF558Q96NG5 402 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 GPR21Q99679 349 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 NUSAP1Q9BXS6 441 aaKnown RBP13.62□□□□□ -0.23
THBS3-202ENST00000428962 RNF38Q9H0F5 515 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PFDN4Q9NQP4 134 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 LHX3Q9UBR4 397 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 MAFFQ9ULX9 164 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 PKP3Q9Y446 797 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 DTNAQ9Y4J8 743 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 DNAJC15Q9Y5T4 150 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 GBF1Q92538 1859 aa13.62□□□□□ -0.23
THBS3-202ENST00000428962 NRP2O60462 931 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 ECI2O75521 394 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
THBS3-202ENST00000428962 STAMBPO95630 424 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 MLYCDO95822 493 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 URODP06132 367 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 RPS17P08708 135 aaKnown RBP13.61□□□□□ -0.23
THBS3-202ENST00000428962 PRSS56P0CW18 603 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 PTGER3P43115 390 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 ADARP55265 1226 aaKnown RBP13.61□□□□□ -0.23
THBS3-202ENST00000428962 AP1S1P61966 158 aa13.61□□□□□ -0.23
THBS3-202ENST00000428962 SMAD3P84022 425 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms