RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EPS8Q12929 822 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CAPSQ13938 189 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM83EQ2M2I3 478 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ABHD15Q6UXT9 468 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 BEND5Q7L4P6 421 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 RBM23Q86U06 439 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC103Q8IW40 242 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 REM2Q8IYK8 340 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 TMBIM1Q969X1 311 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 BIRC7Q96CA5 298 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF560Q96MR9 790 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 RNF145Q96MT1 663 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 C11orf84Q9BUA3 381 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 JPH1Q9HDC5 661 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 STAP1Q9ULZ2 295 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ITM2BQ9Y287 266 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 AP3B1O00203 1094 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCRL2O00421 344 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 IPO13O94829 963 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 MFN2O95140 757 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 KCNA5P22460 613 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 NMBRP28336 390 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ARL1P40616 181 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 NCS1P62166 190 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 RACK1P63244 317 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 GALK2Q01415 458 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 LIPEQ05469 1076 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ATAD3CQ5T2N8 411 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ARHGEF16Q5VV41 709 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ZCCHC8Q6NZY4 707 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 RPS27LQ71UM5 84 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 STK32CQ86UX6 486 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 MFSD6LQ8IWD5 586 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM20CQ8IXL6 584 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CPXCR1Q8N123 301 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC185Q8N715 623 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 BEND7Q8N7W2 519 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 NETO2Q8NC67 525 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCNYQ8ND76 341 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 IL17RDQ8NFM7 739 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 HEXDCQ8WVB3 486 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CENPIQ92674 756 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 RORBQ92753 470 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 C19orf60Q96EN9 201 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC10A4Q96EP9 437 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 C3orf30Q96M34 536 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 MBOAT4Q96T53 435 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 MRPL4Q9BYD3 311 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC90BQ9GZT6 254 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CYP4F12Q9HCS2 524 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM49BQ9NUQ9 324 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 IL37Q9NZH6 218 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 OSGIN1Q9UJX0 560 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 MAU2Q9Y6X3 613 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 PTGES3LE9PB15 166 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 IMPDH1P20839 514 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 IL12AP29459 219 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 GRIK1P39086 918 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ARL4AP40617 200 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 NPY2RP49146 381 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 UGP2Q16851 508 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 RABL3Q5HYI8 236 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 MAP1SQ66K74 1059 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 KCTD11Q693B1 232 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 CLEC6AQ6EIG7 209 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 CCBE1Q6UXH8 406 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 SCUBE3Q8IX30 993 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC38A6Q8IZM9 456 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 MIER2Q8N344 545 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 KIAA1958Q8N8K9 716 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF555Q8NEP9 628 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PJA1Q8NG27 643 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 MCFD2Q8NI22 146 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 AFG1LQ8WV93 481 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PROX1Q92786 737 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 SDCCAG3Q96C92 435 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 AMBRA1Q9C0C7 1298 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PRDM12Q9H4Q4 367 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC38A10Q9HBR0 1119 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 LTB4R2Q9NPC1 389 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 FBXO5Q9UKT4 447 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 MAGED1Q9Y5V3 778 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 OAS3Q9Y6K5 1087 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 OTOFQ9HC10 1997 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 SYCE1LA8MT33 242 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 A8MT66 165 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 MATN4O95460 622 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC159P0C7I6 412 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 BDNFP23560 247 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 IFNA8P32881 189 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PIGAP37287 484 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 MRPS15P82914 257 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 FPGSQ05932 587 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 FXNQ16595 210 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PRR23BQ6ZRT6 265 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 CDR2LQ86X02 465 aaPredicted RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 DCP1BQ8IZD4 617 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 PYROXD2Q8N2H3 581 aa7.99□□□□□ -1.13
HMGXB4-202ENST00000418170 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms