RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 OR1D2P34982 312 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 GPD2P43304 727 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 NSFP46459 744 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PTDSS1P48651 473 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 DGKEP52429 567 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 VAV2P52735 878 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 BCAT1P54687 386 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 ARPP19P56211 112 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SLC8A3P57103 927 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 ROR1Q01973 937 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 BST2Q10589 180 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SMARCB1Q12824 385 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 GPR17Q13304 367 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 TUBB3Q13509 450 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PTPN14Q15678 1187 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 CCDC142Q17RM4 750 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 CACHD1Q5VU97 1274 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 NAA35Q5VZE5 725 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SP5Q6BEB4 398 aaPredicted RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PLAG1Q6DJT9 500 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 FCRL6Q6DN72 434 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SFRP4Q6FHJ7 346 aaPredicted RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 ACAD10Q6JQN1 1059 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PPP1R2P3Q6NXS1 205 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PGBD2Q6P3X8 592 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 H2AFVQ71UI9 128 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 TTC30AQ86WT1 665 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 ERICH1Q86X53 443 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PHF13Q86YI8 300 aaPredicted RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SPATA2LQ8IUW3 424 aaPredicted RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 WDTC1Q8N5D0 677 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 TMEM35BQ8NCS4 154 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 C1orf131Q8NDD1 294 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 UBA3Q8TBC4 463 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 BPIFB1Q8TDL5 484 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SECISBP2LQ93073 1101 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 MYEOVQ96EZ4 313 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SMARCD1Q96GM5 515 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PLEKHG4BQ96PX9 1271 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 NELL2Q99435 816 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 CLSTN3Q9BQT9 956 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 DESI2Q9BSY9 194 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 DUSP16Q9BY84 665 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 ISCUQ9H1K1 167 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 UNKLQ9H9P5 680 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PPCSQ9HAB8 311 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 SLC28A3Q9HAS3 691 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 HEYLQ9NQ87 328 aaPredicted RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 TMLHEQ9NVH6 421 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 TAS2R14Q9NYV8 317 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 MRPS17Q9Y2R5 130 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 PPP2R2CQ9Y2T4 447 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 REXO2Q9Y3B8 237 aaKnown RBP6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 CDY1Q9Y6F8 540 aa6.08□□□□□ -1.44
NIFKP3-201ENST00000417799 TRGV11A0A075B6L2 103 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 A0A1W2PPC1 479 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 WDR27A2RRH5 827 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 MTMR11A4FU01 709 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 TULP2O00295 520 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 XPO1O14980 1071 aaKnown RBP6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 TEX28O15482 410 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 FFAR2O15552 330 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 ADAM12O43184 909 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 ZSCAN12O43309 604 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 LPXNO60711 386 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 BEST1O76090 585 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 VNN2O95498 520 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 NDST3O95803 873 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 CCDC175P0C221 793 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 FAM200BP0CF97 657 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 BDNFP23560 247 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 GATA3P23771 443 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 CYP2F1P24903 491 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 DNAJB1P25685 340 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 ZFP36P26651 326 aaKnown RBP6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 CD6P30203 668 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 MAGEA11P43364 429 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 GABRB2P47870 512 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 RPL34P49207 117 aaKnown RBP6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 ITGA8P53708 1063 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 PRKAG1P54619 331 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 GALCP54803 685 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 MAP3K7CLP57077 242 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 SNX16P57768 344 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 EFEMP1Q12805 493 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 PDCLQ13371 301 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 GPM6BQ13491 265 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 CAMK1Q14012 370 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 E2F2Q14209 437 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 SMC1AQ14683 1233 aaKnown RBP6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 CFAP221Q4G0U5 840 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 RBM20Q5T481 1227 aaKnown RBP6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 ARHGAP40Q5TG30 622 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 TPGS2Q68CL5 300 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 PMF1Q6P1K2 205 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 FBXO38Q6PIJ6 1188 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 VSTM1Q6UX27 236 aa6.07□□□□□ -1.44
NIFKP3-201ENST00000417799 CLEC20AQ6ZU45 233 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms