RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 SPESP1Q6UW49 350 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 DLK2Q6UY11 383 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 AKAP14Q86UN6 197 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SLC15A3Q8IY34 581 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SVOPLQ8N434 492 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 UHRF1Q96T88 793 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 ERVK-6Q9BXR3 956 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 NT5MQ9NPB1 228 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 PDGFCQ9NRA1 345 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SBF2Q86WG5 1849 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 PNMA8CA0A1B0GUJ8 204 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SAGE2PA6NJ88 616 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 DCLK1O15075 740 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 NDUFS2O75306 463 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 CCT8P50990 548 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 WNT3AP56704 352 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 TECRLQ5HYJ1 363 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 DEFB128Q7Z7B8 93 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 C2CD4AQ8NCU7 369 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 OR52K2Q8NGK3 314 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 MAELQ96JY0 434 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SEMA4BQ9NPR2 832 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 AGPAT4Q9NRZ5 378 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 TRMT6Q9UJA5 497 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 CLIC3O95833 236 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 USP17L7P0C7H9 530 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 HTR7P34969 479 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 MTHFRP42898 656 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 NR6A1Q15406 480 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 TIGD2Q4W5G0 525 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 GPR158Q5T848 1215 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 RSBN1Q5VWQ0 802 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 TMEM214Q6NUQ4 689 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 TXNDC11Q6PKC3 985 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 PRR23BQ6ZRT6 265 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SPATA22Q8NHS9 363 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 TBC1D15Q8TC07 691 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 CRYL1Q9Y2S2 319 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 COL1A2P08123 1366 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 IFRD1O00458 451 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 CD3EAPO15446 510 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 KCNH1O95259 989 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 C22orf31O95567 290 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 GRK3P35626 688 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 LCP2Q13094 533 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 MAD2L1Q13257 205 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 PPP1R3AQ16821 1122 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 CACHD1Q5VU97 1274 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 MAMDC4Q6UXC1 1216 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 BLOC1S5Q8TDH9 187 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 HDAC2Q92769 488 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 SMARCD1Q96GM5 515 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 HGH1Q9BTY7 390 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 NUSAP1Q9BXS6 441 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 LRRC3Q9BY71 257 aa11.56□□□□□ -0.56
SCN4B-202ENST00000415030 KIAA0100Q14667 2235 aaKnown RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 COL16A1Q07092 1604 aaPredicted RBP11.56□□□□□ -0.56
SCN4B-202ENST00000415030 MYO1GB0I1T2 1018 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 PGK1P00558 417 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 MTHFD1P11586 935 aaKnown RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 HOXD12P35452 270 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 DPP6P42658 865 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 HORMAD1Q86X24 394 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 SLC15A4Q8N697 577 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 FBXO30Q8TB52 745 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 AURKBQ96GD4 344 aaPredicted RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 MLPHQ9BV36 600 aaPredicted RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 ARMC7Q9H6L4 198 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 CDH9Q9ULB4 789 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 PRG3Q9Y2Y8 225 aaPredicted RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 HES2Q9Y543 173 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 HEMK1Q9Y5R4 338 aaPredicted RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 A0A1W2PP18 115 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 TBKBP1A7MCY6 615 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 ZNF99A8MXY4 864 aaPredicted RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 SLC7A4O43246 635 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 FAM20BO75063 409 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 LRIG2O94898 1065 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 NCK1P16333 377 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 IL12AP29459 219 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 GTF2H3Q13889 308 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 GRIK4Q16099 956 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 LBX2Q6XYB7 198 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 CMTR2Q8IYT2 770 aaKnown RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 AMER2Q8N7J2 671 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 SNX27Q96L92 541 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 SARS2Q9NP81 518 aaKnown RBP11.55□□□□□ -0.56
SCN4B-202ENST00000415030 PIGVQ9NUD9 493 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 PCDHGB4Q9UN71 923 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 PCDHGB5Q9Y5G0 923 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 CYBBP04839 570 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 PCNAP12004 261 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 FLT3LGP49771 235 aa11.55□□□□□ -0.56
SCN4B-202ENST00000415030 TSTD2Q5T7W7 516 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms