RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PGBD5Q8N414 524 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 CXorf40AQ8TE69 158 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 VMP1Q96GC9 406 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 SPOCK3Q9BQ16 436 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 CPEB1Q9BZB8 566 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 SP110Q9HB58 689 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 IPO11Q9UI26 975 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 RAXQ9Y2V3 346 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 LUC7L2Q9Y383 392 aaKnown RBP9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 A8MX80 341 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 SCAMP1O15126 338 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 AKR1B10O60218 316 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 GCATO75600 419 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 MTA2O94776 668 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 ATP6V1G2O95670 118 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 SYF2O95926 243 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 CSF2P04141 144 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 C6P13671 934 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 NME1P15531 152 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 CKMT2P17540 419 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 GM2AP17900 193 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 GJC1P36383 396 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 EIF4A3P38919 411 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 MMP12P39900 470 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 CYP4F3Q08477 520 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 TARDBPQ13148 414 aaKnown RBP eCLIP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF211Q13398 564 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 C1orf61Q13536 156 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 TMEM52BQ4KMG9 183 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 TMEM53Q6P2H8 277 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 ALKBH5Q6P6C2 394 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 PARGQ86W56 976 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 PSTKQ8IV42 348 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 PELI3Q8N2H9 469 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 NIPA2Q8N8Q9 360 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 PLA2G15Q8NCC3 412 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 OR4C6Q8NH72 309 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 NDNQ99608 321 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 CINPQ9BW66 212 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 CLK4Q9HAZ1 481 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 NOD2Q9HC29 1040 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF304Q9HCX3 659 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 TMCC3Q9ULS5 477 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 EFR3BQ9Y2G0 817 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 TIMM22Q9Y584 194 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 PCDHGA1Q9Y5H4 931 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 ADGRG1Q9Y653 693 aa9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 TDRD6O60522 2096 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-202ENST00000409020 H3BRJ5 948 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 K7ESM1 405 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 TRAFD1O14545 582 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 MAFKO60675 156 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 TM7SF2O76062 418 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 ANP32DO95626 131 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 GSTA2P09210 222 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 JUNDP17535 347 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 ACP1P24666 158 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 HCAR3P49019 387 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 TAS2R40P59535 323 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 MAXP61244 160 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 PDE1BQ01064 536 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 GSTM4Q03013 218 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 RAD51Q06609 339 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 IL10RBQ08334 325 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 RALGDSQ12967 914 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 ASTE1Q2TB18 679 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 WSCD2Q2TBF2 565 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 DEFB133Q30KQ1 61 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 C4orf46Q504U0 113 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 NEPROQ6NW34 567 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 CEP128Q6ZU80 1094 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 WDR75Q8IWA0 830 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 ESX1Q8N693 406 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 DENND6BQ8NEG7 585 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF564Q8TBZ8 553 aaPredicted RBP9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 LMX1AQ8TE12 382 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 ASB12Q8WXK4 309 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 PMM1Q92871 262 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 APOLD1Q96LR9 279 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 SMIM14Q96QK8 99 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 SH3GL2Q99962 352 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 FAM192AQ9GZU8 254 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 CTNNAL1Q9UBT7 734 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 OR1A2Q9Y585 309 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 PCDHGC4Q9Y5F7 938 aa9.69□□□□□ -0.86
NIF3L1-202ENST00000409020 A0A0U1RQS6 177 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 MFSD11O43934 449 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 DIAPH2O60879 1101 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 PCCBP05166 539 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 JUPP14923 745 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 ARSEP51690 589 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 CDH6P55285 790 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 WASHC5Q12768 1159 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 DPYSL3Q14195 570 aa9.68□□□□□ -0.86
NIF3L1-202ENST00000409020 PIGHQ14442 188 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms