RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 ZFYVE1Q9HBF4 777 aa12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 MAGEE1Q9HCI5 957 aa12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 ETNK2Q9NVF9 386 aa12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 KCNK4Q9NYG8 393 aa12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 DTLQ9NZJ0 730 aa12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 NFKBIL1Q9UBC1 381 aaPredicted RBP12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 LOXL2Q9Y4K0 774 aa12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
SNORD88B-201ENST00000408454 A0A0A6YYK5 440 aaPredicted RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 STMND1H3BQB6 276 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 VEGFDO43915 354 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 NOBOXO60393 691 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 JCHAINP01591 159 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 CTPS1P17812 591 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 LHCGRP22888 699 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 IL4RP24394 825 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 ITPKBP27987 946 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 ADCY8P40145 1251 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 ARSEP51690 589 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 SOWAHCQ53LP3 525 aaPredicted RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 MANEAQ5SRI9 462 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 CCDC181Q5TID7 509 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 LYSMD3Q7Z3D4 306 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 PGBD5Q8N414 524 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 Q8N9G6 341 aaPredicted RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 BRSK1Q8TDC3 778 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 TFB1MQ8WVM0 346 aaKnown RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 P3H4Q92791 437 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 ARHGAP9Q9BRR9 750 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 GPR63Q9BZJ6 419 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 ABCG8Q9H221 673 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 TRIT1Q9H3H1 467 aaKnown RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 MRPL40Q9NQ50 206 aaKnown RBP12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 PISDQ9UG56 409 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 ZNHIT2Q9UHR6 403 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 CHKBQ9Y259 395 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 RNF215Q9Y6U7 377 aa12.78□□□□□ -0.36
SNORD88B-201ENST00000408454 APC2O95996 2303 aa12.77□□□□□ -0.36
SNORD88B-201ENST00000408454 HACD1B0YJ81 288 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 K7ENP7 123 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 ZRANB2O95218 330 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 EPOP01588 193 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 ITGB2P05107 769 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 PYGMP11217 842 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 MYF5P13349 255 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 CD86P42081 329 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 SPINT3P49223 89 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 HADHBP55084 474 aaKnown RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 SKOR1P84550 965 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 PDE1BQ01064 536 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 CTBSQ01459 385 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 DSC2Q02487 901 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 CDK18Q07002 472 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 ZFP36L1Q07352 338 aaKnown RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 MMRN1Q13201 1228 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 TFDP3Q5H9I0 405 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 ITPRIPL1Q6GPH6 555 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 DOK6Q6PKX4 331 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 USP53Q70EK8 1073 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 C17orf82Q86X59 251 aaPredicted RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 TRIM48Q8IWZ4 208 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 KIAA1143Q96AT1 154 aaPredicted RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 PLEKHG4BQ96PX9 1271 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 TAAR9Q96RI9 348 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 RIOK2Q9BVS4 552 aaKnown RBP12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 DDA1Q9BW61 102 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 LGR4Q9BXB1 951 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 TRIM5Q9C035 493 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 NENFQ9UMX5 172 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 CHD6Q8TD26 2715 aa12.77□□□□□ -0.37
SNORD88B-201ENST00000408454 ARID1BQ8NFD5 2236 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 KMOO15229 486 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 SLC25A14O95258 325 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 ECEL1O95672 775 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 NDST3O95803 873 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 FGF1P05230 155 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 HLA-DQB2P05538 268 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 PTMAP06454 111 aaKnown RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 TCF4P15884 667 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 CTNNA2P26232 953 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 SLC5A2P31639 672 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 HALP42357 657 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 CLCNKAP51800 687 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 COPS2P61201 443 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 HHEXQ03014 270 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 PTSQ03393 145 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 CFHR1Q03591 330 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 GBE1Q04446 702 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms