RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 OR10Q1Q8NGQ4 319 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 PMEPA1Q969W9 287 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 MYLPFQ96A32 169 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 TEKT5Q96M29 485 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 ZFP14Q9HCL3 533 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 OAZ3Q9UMX2 235 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 ANKRD6Q9Y2G4 727 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 CCDC154A6NI56 674 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 MEIS3P2A8K0S8 358 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 EI24O14681 340 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SEC24AO95486 1093 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SMPD1P17405 629 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 CD97P48960 835 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 CLCNKBP51801 687 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 DDR2Q16832 855 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 CLEC20AQ6ZU45 233 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 KBTBD6Q86V97 674 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 TCF12Q99081 682 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SEMA3CQ99985 751 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 ZSCAN5AQ9BUG6 496 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 RUBCNLQ9H714 662 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 PKP3Q9Y446 797 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SLC12A8A0AV02 714 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 H6PDO95479 791 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SMIM10L2AP0DMW4 78 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SMIM10L2BP0DMW5 78 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 XIAPP98170 497 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 SQLEQ14534 574 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 DEPDC1Q5TB30 811 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 RAP1GAP2Q684P5 730 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 OVOS1Q6IE37 1185 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 LRRC49Q8IUZ0 686 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 LRRC52Q8N7C0 313 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 METTL6Q8TCB7 284 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 CCDC126Q96EE4 140 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 FAR2Q96K12 515 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 EXD2Q9NVH0 621 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 BTBD3Q9Y2F9 522 aa11.91□□□□□ -0.5
HMGB1-206ENST00000405805 A0A1W2PPW3 197 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 HS6ST1O60243 411 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 PEX14O75381 377 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ZNF682O95780 498 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SLC2A3P11169 496 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SLC2A4P14672 509 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ENDOUP21128 410 aaKnown RBP11.9□□□□□ -0.5
HMGB1-206ENST00000405805 THPOP40225 353 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 IL5RAQ01344 420 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ANKDD1AQ495B1 522 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ZNF789Q5FWF6 425 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 RABL3Q5HYI8 236 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 HECTD2Q5U5R9 776 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SPESP1Q6UW49 350 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 TIFABQ6ZNK6 161 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 CLHC1Q8NHS4 586 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 UNC93B1Q9H1C4 597 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ZBTB26Q9HCK0 441 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 MTMR10Q9NXD2 777 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 MTF2Q9Y483 593 aaPredicted RBP11.9□□□□□ -0.5
HMGB1-206ENST00000405805 COL4A5P29400 1685 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 FUOMA2VDF0 154 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 G3V2L1 256 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 PIP5K1BO14986 540 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 TFAP2AP05549 437 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 OR1E1P30953 314 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 NIPAL4Q0D2K0 466 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SPOUT1Q5T280 376 aaKnown RBP11.9□□□□□ -0.5
HMGB1-206ENST00000405805 PHC2Q8IXK0 858 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ZNF555Q8NEP9 628 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 C19orf60Q96EN9 201 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 HGH1Q9BTY7 390 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ALG2Q9H553 416 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 FAIMQ9NVQ4 179 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 FAM25AB3EWG3 89 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 FAM25CB3EWG5 89 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 FAM25GB3EWG6 89 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 CBX4O00257 560 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 TBC1D4O60343 1298 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 FBXO21O94952 628 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 CCNCP24863 283 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ANKS6Q68DC2 871 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 RNF111Q6ZNA4 994 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 TMEM26Q6ZUK4 368 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 LILRA2Q8N149 483 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SMARCD1Q96GM5 515 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SYT17Q9BSW7 474 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 SLC39A8Q9C0K1 460 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 TOR4AQ9NXH8 423 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 CACNA2D2Q9NY47 1150 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 IGSF9Q9P2J2 1179 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ZNHIT2Q9UHR6 403 aa11.9□□□□□ -0.5
HMGB1-206ENST00000405805 CNOT6Q9ULM6 557 aaKnown RBP11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ABT1Q9ULW3 272 aaKnown RBP11.9□□□□□ -0.5
HMGB1-206ENST00000405805 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
HMGB1-206ENST00000405805 CDK4P11802 303 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms