RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CDH18Q13634 790 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PTPRNQ16849 979 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ARMC12Q5T9G4 340 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 HPS6Q86YV9 775 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CARNMT1Q8N4J0 409 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MRPS31Q92665 395 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RCN3Q96D15 328 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ALG14Q96F25 216 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 BIRC8Q96P09 236 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CDRT15Q96T59 188 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 NUSAP1Q9BXS6 441 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TMEM39AQ9NV64 488 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 IL17CQ9P0M4 197 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TRMT6Q9UJA5 497 aaKnown RBP17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RNF112Q9ULX5 631 aa17.64■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ANAPC1Q9H1A4 1944 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TMEM233B4DJY2 109 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 H3BMM5 538 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 AZIN1O14977 448 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 BAG2O95816 211 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SNRPB2P08579 225 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 GFAPP14136 432 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 FMO4P31512 558 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MC4RP32245 332 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MRPL19P49406 292 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TRAF2Q12933 501 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 FASTKQ14296 549 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PTPRCAPQ14761 206 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CRY1Q16526 586 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ZNF423Q2M1K9 1284 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SPATS1Q496A3 300 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MPPE1Q53F39 396 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TMEM198Q66K66 360 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PAQR3Q6TCH7 311 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CCDC149Q6ZUS6 474 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 C16orf59Q7L2K0 433 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 FBXO39Q8N4B4 442 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 FAM136AQ96C01 138 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 C19orf60Q96EN9 201 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 IL21Q9HBE4 155 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 EPS15L1Q9UBC2 864 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 WASF2Q9Y6W5 498 aa17.63■□□□□ 0.41
HLA-DQB1-204ENST00000399084 COL4A6Q14031 1691 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 UBFD1O14562 309 aaKnown RBP17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 LILRB3O75022 631 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CDK14O94921 469 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PLK1P53350 603 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 OR4D1Q15615 310 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 KANK2Q63ZY3 851 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PCYOX1LQ8NBM8 494 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ROPN1LQ96C74 230 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PPP1R36Q96LQ0 422 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 NSMCE3Q96MG7 304 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 VCXQ9H320 206 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SPATS2LQ9NUQ6 558 aaKnown RBP17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 KIAA1522Q9P206 1035 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 VPS51Q9UID3 782 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 APPL1Q9UKG1 709 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PPM1HQ9ULR3 514 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PSMD13Q9UNM6 376 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MED16Q9Y2X0 877 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ACTL7AQ9Y615 435 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SLC30A1Q9Y6M5 507 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PCNTO95613 3336 aa17.62■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PDE5AO76074 875 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PGLSO95336 258 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CLTBP09497 229 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RPS3P23396 243 aaKnown RBP eCLIP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ABL2P42684 1182 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SH3BP2P78314 561 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TRAP1Q12931 704 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 PFKFB4Q16877 469 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SETMARQ53H47 684 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 COQ5Q5HYK3 327 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RTL10Q7L3V2 364 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RYBPQ8N488 228 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CATSPER1Q8NEC5 780 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 EXOC2Q96KP1 924 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ACSS2Q9NR19 701 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 LTBP2Q14767 1821 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TRIM38O00635 465 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SNAP91O60641 907 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CLASP2O75122 1294 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SKAP2O75563 359 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 BCAS2O75934 225 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 BAIAP3O94812 1187 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CHEK2O96017 543 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 RPS17P08708 135 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MZF1P28698 734 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MNX1P50219 401 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CLCQ05315 142 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 MMEL1Q495T6 779 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 ZRANB3Q5FWF4 1079 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 TRIM68Q6AZZ1 485 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 OGFOD2Q6N063 350 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 SPATA19Q7Z5L4 167 aa17.61■□□□□ 0.41
HLA-DQB1-204ENST00000399084 CBARPQ8N350 705 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms