RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 LIN54Q6MZP7 749 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 DRICH1Q6PGQ1 229 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 USP45Q70EL2 814 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 FAM83AQ86UY5 434 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 KIAA0319LQ8IZA0 1049 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SKA1Q96BD8 255 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 AGAP2Q99490 1192 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 FEM1AQ9BSK4 669 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 NXF3Q9H4D5 531 aaKnown RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MARCH2Q9P0N8 246 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 FAM198AQ9UFP1 575 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ZNF536O15090 1300 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 A0A1W2PQ72 361 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SLC22A2O15244 555 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 PGRP06401 933 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 LINGO3P0C6S8 592 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 DPEP1P16444 411 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 WEE1P30291 646 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TGFBR2P37173 567 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 WNT3AP56704 352 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TUBA4AP68366 448 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 EN1Q05925 392 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SCN1BQ07699 218 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SFT2D3Q587I9 215 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 LYPLAL1Q5VWZ2 237 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TMEM214Q6NUQ4 689 aaKnown RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 USP43Q70EL4 1123 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 VSIG10LQ86VR7 867 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 PGBD3Q8N328 593 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CLIP4Q8N3C7 705 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CNPPD1Q9BV87 410 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SPATA5L1Q9BVQ7 753 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SYNDIG1Q9H7V2 258 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SMPD4Q9NXE4 827 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 NKRFO15226 690 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 B4GALT5O43286 388 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CSH1P0DML2 217 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CSH2P0DML3 217 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 NR2F1P10589 423 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 AZGP1P25311 298 aaKnown RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MC4RP32245 332 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 GUCA1AP43080 201 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CDH15P55291 814 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ZNF460Q14592 562 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MFSD10Q14728 455 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 PPM1LQ5SGD2 360 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 UNC5BQ8IZJ1 945 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 GATA5Q9BWX5 397 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MED28Q9H204 178 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TOR3AQ9H497 397 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 GLOD4Q9HC38 313 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MFHAS1Q9Y4C4 1052 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MYH8P13535 1937 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 A0A1W2PRG6 482 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 H0YGN5 161 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TBX1O43435 398 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 NPHS1O60500 1241 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 BMP10O95393 424 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 AP2A1O95782 977 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ATF4P18848 351 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SLC7A1P30825 629 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 OR2B6P58173 313 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 BNIP3Q12983 259 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 HKDC1Q2TB90 917 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TRIM40Q6P9F5 258 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 EMID1Q96A84 441 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CIPCQ9C0C6 399 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MARCH7Q9H992 704 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 EXD2Q9NVH0 621 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 NFS1Q9Y697 457 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TLL2Q9Y6L7 1015 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 IRGMA1A4Y4 181 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ARHGEF33A8MVX0 844 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CKBP12277 381 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ITGB5P18084 799 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 NMBRP28336 390 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 AQP1P29972 269 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 HNF4AP41235 474 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 IRF9Q00978 393 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 MTAPQ13126 283 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 ACAP2Q15057 778 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TEX44Q53QW1 395 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 TNFAIP8L3Q5GJ75 292 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CELF3Q5SZQ8 465 aaKnown RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CNSTQ6PJW8 725 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 STRADAQ7RTN6 431 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 DQX1Q8TE96 717 aaKnown RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 PIGUQ9H490 435 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 UXTQ9UBK9 157 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-205ENST00000399050 CLEC4AQ9UMR7 237 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 DHRS7Q9Y394 339 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 HES2Q9Y543 173 aa8.61□□□□□ -1.03
CTNND1-205ENST00000399050 EFCAB9A8MZ26 197 aa8.6□□□□□ -1.03
CTNND1-205ENST00000399050 FPGTO14772 594 aa8.6□□□□□ -1.03
CTNND1-205ENST00000399050 DNAJA2O60884 412 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms