RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 SULT1C3Q6IMI6 304 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 APTXQ7Z2E3 356 aaKnown RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PGLYRP2Q96PD5 576 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 LRTM1Q9HBL6 345 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 LOC100506127A0A0U1RQW1 187 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 RGS10O43665 173 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 SIN3BO75182 1162 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PRPS2P11908 318 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 MMP8P22894 467 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 HSD17B2P37059 387 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 IDH2P48735 452 aaKnown RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 ARHGDIBP52566 201 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 KLF10Q13118 480 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 NIPA2Q8N8Q9 360 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 FAM81AQ8TBF8 368 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 DNAJB14Q8TBM8 379 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 P2RY11Q96G91 374 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PDCD10Q9BUL8 212 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 ADGRE2Q9UHX3 823 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 TCAF1Q9Y4C2 921 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 LYVE1Q9Y5Y7 322 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GLYATL1P3A0A0U1RQE8 302 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 TGFB1I1O43294 461 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 TRMUO75648 421 aaKnown RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 KLHL18O94889 574 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 CAPN1P07384 714 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GLUD2P49448 558 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 GPR142Q7Z601 462 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 UXS1Q8NBZ7 420 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 RFKQ969G6 155 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 MARK4Q96L34 752 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 CHCHD6Q9BRQ6 235 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 SGK2Q9HBY8 427 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 MOV10Q9HCE1 1003 aaKnown RBP8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 UPB1Q9UBR1 384 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 DHRS7Q9Y394 339 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 PTPRJQ12913 1337 aa8.34□□□□□ -1.07
SPTLC3-201ENST00000399002 TCEA3O75764 348 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 CLDN9O95484 217 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 DHFRP00374 187 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 RPL4P36578 427 aaKnown RBP8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 SCNN1AP37088 669 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 CCNFP41002 786 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 MTHFRP42898 656 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 PITPNAQ00169 270 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 CNTN2Q02246 1040 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 TEAD4Q15561 434 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 DNAAF5Q86Y56 855 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 FAR1Q8WVX9 515 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 CLCC1Q96S66 551 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 NDNQ99608 321 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 MRPL45Q9BRJ2 306 aaKnown RBP8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 LRRC4CQ9HCJ2 640 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 IL1RAPQ9NPH3 570 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 PIH1D1Q9NWS0 290 aaKnown RBP8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 GPN3Q9UHW5 284 aaPredicted RBP8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 MSRAQ9UJ68 235 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 BTRCQ9Y297 605 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 GPSM3Q9Y4H4 160 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 COLEC10Q9Y6Z7 277 aa8.34□□□□□ -1.08
SPTLC3-201ENST00000399002 BCKDKO14874 412 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ADAMDEC1O15204 470 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PAGE1O75459 146 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 WNT3AP56704 352 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 LARS2Q15031 903 aaKnown RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CES5AQ6NT32 575 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TAPT1Q6NXT6 567 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 FOXR1Q6PIV2 292 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SAMD14Q8IZD0 417 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CDYL2Q8N8U2 506 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 AZIN2Q96A70 460 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CSPG4P5Q96PW8 444 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 YTHDF1Q9BYJ9 559 aaKnown RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SOHLH2Q9NX45 425 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PEX16Q9Y5Y5 336 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PDCD5O14737 125 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 USP12O75317 370 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SERPINA1P01009 418 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 AMD1P17707 334 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 IGFBP5P24593 272 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ARL2P36404 184 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TNFSF9P41273 254 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CYP1B1Q16678 543 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 EIPR1Q53HC9 387 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC22A17Q8WUG5 538 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TWIST2Q8WVJ9 160 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TOP1MTQ969P6 601 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TLCD1Q96CP7 247 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 RAB11FIP5Q9BXF6 653 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF222Q9UK12 451 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF490Q9ULM2 529 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 OR10H1Q9Y4A9 318 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CNTNAP1P78357 1384 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 UBR1Q8IWV7 1749 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PQBP1O60828 265 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms