RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CTSEP14091 401 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 ADRA1AP35348 466 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 CHRNA4P43681 627 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 POLD2P49005 469 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 DUSP3P51452 185 aaPredicted RBP16.61■□□□□ 0.25
APTR-201ENST00000398043 DCDC1P59894 354 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 E2F1Q01094 437 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 SLC1A5Q15758 541 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 SIRPB2Q5JXA9 342 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 CDCP2Q5VXM1 449 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 OGFOD3Q6PK18 319 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 KDF1Q8NAX2 398 aaPredicted RBP16.61■□□□□ 0.25
APTR-201ENST00000398043 TTC13Q8NBP0 860 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 GPR26Q8NDV2 337 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 CCHCR1Q8TD31 782 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 HIC2Q96JB3 615 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 FAM83DQ9H4H8 585 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 PKD2L2Q9NZM6 624 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 RSPH14Q9UHP6 348 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 SHOC2Q9UQ13 582 aa16.61■□□□□ 0.25
APTR-201ENST00000398043 BPTFQ12830 3046 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 GOLGA6CA6NDK9 693 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 GOLGA6BA6NDN3 693 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 KCNN4O15554 427 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 OPA1O60313 960 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 GOLGA6DP0CG33 693 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 MSLNQ13421 630 aaPredicted RBP16.6■□□□□ 0.25
APTR-201ENST00000398043 NR0B2Q15466 257 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 TCEA2Q15560 299 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 PERM1Q5SV97 790 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 HES3Q5TGS1 186 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 DARS2Q6PI48 645 aaKnown RBP16.6■□□□□ 0.25
APTR-201ENST00000398043 RANBP10Q6VN20 620 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 TRIM74Q86UV6 250 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 GKN2Q86XP6 184 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 TTC30BQ8N4P2 665 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 GPR156Q8NFN8 814 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 IFI44Q8TCB0 444 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 SPATA13Q96N96 652 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 SRPK1Q96SB4 655 aaKnown RBP16.6■□□□□ 0.25
APTR-201ENST00000398043 CDH19Q9H159 772 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 TRNAU1APQ9NX07 287 aaKnown RBP16.6■□□□□ 0.25
APTR-201ENST00000398043 GOLGA6AQ9NYA3 693 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 SUFUQ9UMX1 484 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 TMEM98Q9Y2Y6 226 aa16.6■□□□□ 0.25
APTR-201ENST00000398043 OAS3Q9Y6K5 1087 aaKnown RBP16.6■□□□□ 0.25
APTR-201ENST00000398043 C5orf60A6NFR6 353 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 NOBOXO60393 691 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 DNAJC6O75061 913 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 BPIP17213 487 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 PSMB4P28070 264 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 HMGCLP35914 325 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 PYCR3Q53H96 274 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 ITPRIPL1Q6GPH6 555 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 SFTPA2Q8IWL1 248 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 ARL10Q8N8L6 244 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 DCBLD1Q8N8Z6 715 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 KYQ8NBH2 561 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 IPMKQ8NFU5 416 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 CCDC110Q8TBZ0 833 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
APTR-201ENST00000398043 LZTFL1Q9NQ48 299 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 PADI4Q9UM07 663 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 GPR34Q9UPC5 381 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 PPP2R2CQ9Y2T4 447 aa16.59■□□□□ 0.25
APTR-201ENST00000398043 PCYT1BQ9Y5K3 369 aaPredicted RBP16.59■□□□□ 0.25
APTR-201ENST00000398043 URB1O60287 2271 aaKnown RBP16.59■□□□□ 0.25
APTR-201ENST00000398043 TMEM8BA6NDV4 472 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 GOLGA6L9A6NEM1 432 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 CASC3O15234 703 aaKnown RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 INPP4BO15327 924 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 ZNF189O75820 626 aaPredicted RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 ANXA9O76027 345 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 AGTP01019 485 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 HLA-DPA1P20036 260 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 ADCY8P40145 1251 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 GEMP55040 296 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 GDF10P55107 478 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 KCTD11Q693B1 232 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 CCDC70Q6NSX1 233 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 EFL1Q7Z2Z2 1120 aaKnown RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 C17orf82Q86X59 251 aaPredicted RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 SLC25A41Q8N5S1 370 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 SCG3Q8WXD2 468 aaKnown RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 TLR10Q9BXR5 811 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 GPR63Q9BZJ6 419 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 TRABDQ9H4I3 376 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 SPATS2LQ9NUQ6 558 aaKnown RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 EVA1BQ9NVM1 165 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 VPS18Q9P253 973 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 TMPRSS11EQ9UL52 423 aa16.58■□□□□ 0.24
APTR-201ENST00000398043 ANKRD11Q6UB99 2663 aaPredicted RBP16.58■□□□□ 0.24
APTR-201ENST00000398043 CPED1A4D0V7 1026 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 GOLGA6L3A6NEY3 463 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 ATP1A1P05023 1023 aaKnown RBP16.57■□□□□ 0.24
APTR-201ENST00000398043 FGF1P05230 155 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 GNPDA1P46926 289 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 RPIAP49247 311 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 CTBSQ01459 385 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 TARDBPQ13148 414 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms