RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CNGA3Q16281 694 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 CA9Q16790 459 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 RALGPS1Q5JS13 557 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 DCAF12Q5T6F0 453 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 TMEM71Q6P5X7 295 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 RFX8Q6ZV50 586 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 HEATR4Q86WZ0 1026 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 CACNA2D3Q8IZS8 1091 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 NAGSQ8N159 534 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 RCBTB1Q8NDN9 531 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 JPH3Q8WXH2 748 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 NUS1Q96E22 293 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 DTD2Q96FN9 168 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SCRN2Q96FV2 425 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SCARF2Q96GP6 870 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SLC45A3Q96JT2 553 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 CCDC74BQ96LY2 380 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 NSMCE3Q96MG7 304 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 TEFMQ96QE5 360 aaKnown RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 DHX35Q9H5Z1 703 aaKnown RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SP110Q9HB58 689 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SEPT11Q9NVA2 429 aaKnown RBP8.73□□□□□ -1.01
CAPN3-208ENST00000397204 GPATCH2LQ9NWQ4 482 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SLC39A1Q9NY26 324 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 ANAPC2Q9UJX6 822 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 PHTF1Q9UMS5 762 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SUFUQ9UMX1 484 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SLC17A4Q9Y2C5 497 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 PCDHGC4Q9Y5F7 938 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 B3GALT1Q9Y5Z6 326 aa8.73□□□□□ -1.01
CAPN3-208ENST00000397204 SPTBN1Q01082 2364 aaKnown RBP8.72□□□□□ -1.01
CAPN3-208ENST00000397204 TMEM191CA6NGB0 347 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 PRPSAP2O60256 369 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 NTRK1P04629 796 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 THRAP10827 490 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 FERP16591 822 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 CR2P20023 1033 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 TNFAIP3P21580 790 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 AK4P27144 223 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-208ENST00000397204 MAP4P27816 1152 aaKnown RBP8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ETV3P41162 512 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 POLD2P49005 469 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 POLE2P56282 527 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 CDK3Q00526 305 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 DPTQ07507 201 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 SLC10A7Q0GE19 358 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 MAMLD1Q13495 774 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 UBAP2LQ14157 1087 aaKnown RBP8.72□□□□□ -1.01
CAPN3-208ENST00000397204 NKAIN2Q5VXU1 208 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 PLEKHA7Q6IQ23 1121 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 SLC30A9Q6PML9 568 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 Q6ZVL8 140 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 IRF2BP2Q7Z5L9 587 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ARFGAP1Q8N6T3 406 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ANKRD20A12PQ8NF67 263 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ART4Q93070 314 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ERGIC2Q96RQ1 377 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 NUDCD1Q96RS6 583 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ZPBPQ9BS86 351 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 EFHD1Q9BUP0 239 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 SPRY4Q9C004 299 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 GRIP2Q9C0E4 1043 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 NUP62CLQ9H1M0 184 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 SUDS3Q9H7L9 328 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-208ENST00000397204 NOD2Q9HC29 1040 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 FANCLQ9NW38 375 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 KCNK4Q9NYG8 393 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 LIMA1Q9UHB6 759 aaKnown RBP8.72□□□□□ -1.01
CAPN3-208ENST00000397204 PCSK1NQ9UHG2 260 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 PILRAQ9UKJ1 303 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 PPIL1Q9Y3C6 166 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ST14Q9Y5Y6 855 aa8.72□□□□□ -1.01
CAPN3-208ENST00000397204 ZNF891A8MT65 544 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 RAD1O60671 282 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 CPP00450 1065 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 PYGLP06737 847 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ATP1A3P13637 1013 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 LIFP15018 202 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 PSMA2P25787 234 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 MIPP30301 263 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 MAN1A1P33908 653 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 CASRP41180 1078 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ACTR1BP42025 376 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 FASLGP48023 281 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 COPB1P53618 953 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ACTR1AP61163 376 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 MC2RQ01718 297 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 UBXN1Q04323 297 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 POU4F2Q12837 409 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 LRP8Q14114 963 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ZNF235Q14590 738 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 BOLA3Q53S33 107 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 PPP6R3Q5H9R7 873 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 DENND2CQ68D51 928 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 WDR74Q6RFH5 385 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ADAMTSL4Q6UY14 1074 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ARHGAP36Q6ZRI8 547 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ARHGAP22Q7Z5H3 698 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 HSD11B1LQ7Z5J1 315 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 TECPR1Q7Z6L1 1165 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms