RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 STAMBPO95630 424 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 HSPA8P11142 646 aaKnown RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 EEF1DP29692 281 aaKnown RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 SLC11A1P49279 550 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 OXCT1P55809 520 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 CAP1Q01518 475 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 CLCQ05315 142 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 RAD51Q06609 339 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 LCP2Q13094 533 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 TAF1AQ15573 450 aaPredicted RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 MAP7D1Q3KQU3 841 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 RTP2Q5QGT7 225 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 PRMT9Q6P2P2 845 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 CYP2R1Q6VVX0 501 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 GLT6D1Q7Z4J2 308 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 DDIASQ8IXT1 998 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 OR4K2Q8NGD2 314 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 C2orf15Q8WU43 125 aaKnown RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 RMDN1Q96DB5 314 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 PRICKLE1Q96MT3 831 aaPredicted RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 CDK5RAP1Q96SZ6 601 aaKnown RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 TCF12Q99081 682 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 SH3GL3Q99963 347 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 HOPXQ9BPY8 73 aaPredicted RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 SLC39A3Q9BRY0 314 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 SPON2Q9BUD6 331 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 TTLL2Q9BWV7 592 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 MRPS26Q9BYN8 205 aaKnown RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 SEMA6AQ9H2E6 1030 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 TUBB1Q9H4B7 451 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 ELAC1Q9H777 363 aaKnown RBP12.26□□□□□ -0.45
RFC5-201ENST00000392542 COQ10BQ9H8M1 238 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 DNMT3LQ9UJW3 386 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 IKZF3Q9UKT9 509 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 FAM50BQ9Y247 325 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 LZTS1Q9Y250 596 aa12.26□□□□□ -0.45
RFC5-201ENST00000392542 H3BNC9 293 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 H7C4K7 107 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 KDELR3O43731 214 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 NDUFS3O75489 264 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ECI2O75521 394 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 MATN4O95460 622 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ALDH2P05091 517 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 FAM58BPP0C7Q3 252 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 LBPP18428 481 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ATF6P18850 670 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 CR2P20023 1033 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 PSMA3P25788 255 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 RPL5P46777 297 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 GATMP50440 423 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 NME5P56597 212 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 GK3PQ14409 553 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ANKS6Q68DC2 871 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 DHFR2Q86XF0 187 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 MDGA1Q8NFP4 955 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 TUBGCP3Q96CW5 907 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ZNF597Q96LX8 424 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 CASD1Q96PB1 797 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 EFHD1Q9BUP0 239 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 MAP10Q9P2G4 905 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ABCD2Q9UBJ2 740 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 POLG2Q9UHN1 485 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 CNOT6Q9ULM6 557 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 ARIH1Q9Y4X5 557 aaPredicted RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 COMMD3-BMI1R4GMX3 469 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 VPS4BO75351 444 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 CSPG5O95196 566 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 CLPTM1O96005 669 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 TFAP2AP05549 437 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 RPS17P08708 135 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 CAPN3P20807 821 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 SLC11A2P49281 568 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 SCNN1BP51168 640 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 IKBKEQ14164 716 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 USP41Q3LFD5 358 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 PITRM1Q5JRX3 1037 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 OR2T34Q8NGX1 318 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 OR2T3Q8NH03 318 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 EXOC2Q96KP1 924 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 ZFRQ96KR1 1074 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 CYP2S1Q96SQ9 504 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 TDRD1Q9BXT4 1180 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 APPL1Q9UKG1 709 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 BTRCQ9Y297 605 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 PCDHB7Q9Y5E2 793 aa12.25□□□□□ -0.45
RFC5-201ENST00000392542 OAS3Q9Y6K5 1087 aaKnown RBP12.25□□□□□ -0.45
RFC5-201ENST00000392542 C7orf72A4D263 438 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 C2orf81A6NN90 581 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 ZNF839A8K0R7 811 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 SYCE1LA8MT33 242 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 NME4O00746 187 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 ANGPT2O15123 496 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 ATP6V1B2P21281 511 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 CREB5Q02930 508 aa12.24□□□□□ -0.45
RFC5-201ENST00000392542 ELAVL2Q12926 359 aaKnown RBP12.24□□□□□ -0.45
RFC5-201ENST00000392542 TSNQ15631 228 aaKnown RBP12.24□□□□□ -0.45
RFC5-201ENST00000392542 MTX3Q5HYI7 312 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms