RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 HSPE1-MOB4S4R3N1 261 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 PPEF1O14829 653 aaPredicted RBP7.24□□□□□ -1.25
DDX58-202ENST00000379883 BCKDKO14874 412 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 HS6ST1O60243 411 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 DFNA5O60443 496 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 FAM20BO75063 409 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 CAPN15O75808 1086 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 AP2A1O95782 977 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 ICAM1P05362 532 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 UGT2B10P36537 528 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 CDH17Q12864 832 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 VPS72Q15906 364 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 FUT11Q495W5 492 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 VPS26BQ4G0F5 336 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 CCNJQ5T5M9 372 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 FAM183BPQ6ZVS7 135 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 LRRC8DQ7L1W4 858 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 BEND5Q7L4P6 421 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 GET4Q7L5D6 327 aaPredicted RBP7.24□□□□□ -1.25
DDX58-202ENST00000379883 TMEM135Q86UB9 458 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 ZNF598Q86UK7 904 aaKnown RBP7.24□□□□□ -1.25
DDX58-202ENST00000379883 PTRH1Q86Y79 214 aaKnown RBP7.24□□□□□ -1.25
DDX58-202ENST00000379883 SNX29P2Q8IUI4 249 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 SLC41A1Q8IVJ1 513 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 GPRASP2Q96D09 838 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 SOX17Q9H6I2 414 aaPredicted RBP7.24□□□□□ -1.25
DDX58-202ENST00000379883 IPPQ9Y573 584 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 PCDHGB1Q9Y5G3 927 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 ZNF541Q9H0D2 1346 aa7.24□□□□□ -1.25
DDX58-202ENST00000379883 LOC100130705A0A1B0GUX0 176 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 HMX3A6NHT5 357 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 A6NL46 340 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CLDN24A6NM45 220 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 H0Y858 1186 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 GRAP2O75791 330 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CST3P01034 146 aaPredicted RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 IL7P13232 177 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 SHMT2P34897 504 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 RYKP34925 604 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 ETV3P41162 512 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CCR10P46092 362 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 PRKCEQ02156 737 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 FADDQ13158 208 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 DGCR6Q14129 220 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 NPTX1Q15818 432 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 STEAP3Q658P3 488 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 GLYATQ6IB77 296 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 UBE2Q1Q7Z7E8 422 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 C14orf80Q86SX3 495 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 HIPK1Q86Z02 1210 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 ZFPM1Q8IX07 1006 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 PAF1Q8N7H5 531 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 FLCNQ8NFG4 579 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 UBA3Q8TBC4 463 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 HCAR2Q8TDS4 363 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 TUBGCP3Q96CW5 907 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 TWNKQ96RR1 684 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 AGAP2Q99490 1192 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 ACAT2Q9BWD1 397 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 RPF1Q9H9Y2 349 aaKnown RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 PIH1D1Q9NWS0 290 aaKnown RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 PAQR5Q9NXK6 330 aaPredicted RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 EHD3Q9NZN3 535 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 V9GYQ6 96 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CCDC182A6NF36 153 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 TMEM233B4DJY2 109 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 B4GAT1O43505 415 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 AIREO43918 545 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 NPM3O75607 178 aaKnown RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 CNTN5O94779 1100 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 LTA4HP09960 611 aaKnown RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 ERP29P30040 261 aaKnown RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 SLC9A3P48764 834 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 AP2S1P53680 142 aaPredicted RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 IFITM3Q01628 133 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 POU6F1Q14863 301 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 TIMM50Q3ZCQ8 353 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 C8orf82Q6P1X6 216 aaPredicted RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 P2RY11Q96G91 374 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 RIPOR3Q96MK2 946 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CSPG4P5Q96PW8 444 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 IL12RB2Q99665 862 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 DEFB129Q9H1M3 183 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 DYRK4Q9NR20 520 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 VPS4AQ9UN37 437 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 PTPRJQ12913 1337 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 HUS1O60921 280 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 LRIG2O94898 1065 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 MATN4O95460 622 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CST1P01037 141 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CYP11A1P05108 521 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 ALPLP05186 524 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 CD36P16671 472 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 OXTRP30559 389 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 ASPAP45381 313 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 SLC15A1P46059 708 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 SOX10P56693 466 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
DDX58-202ENST00000379883 MRPL28Q13084 256 aaKnown RBP7.23□□□□□ -1.25
DDX58-202ENST00000379883 CAPRIN1Q14444 709 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms