RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 SMOC2Q9H3U7 446 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 LIN28AQ9H9Z2 209 aaKnown RBP12.64□□□□□ -0.39
DDR1-226ENST00000376569 SPAG4Q9NPE6 437 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
DDR1-226ENST00000376569 CPSF4O95639 269 aaKnown RBP12.64□□□□□ -0.39
DDR1-226ENST00000376569 NTRK1P04629 796 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 ACRP10323 421 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 LBPP18428 481 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 KCNC1P48547 511 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 CCNG1P51959 295 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 AIF1P55008 147 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 CLYBLQ8N0X4 340 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 MAF1Q9H063 256 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 COQ10BQ9H8M1 238 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 GID8Q9NWU2 228 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
DDR1-226ENST00000376569 PTGES3LE9PB15 166 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 GRID2O43424 1007 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 CA12O43570 354 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 ZNF682O95780 498 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 INHAP05111 366 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 UQCRBP14927 111 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 LPOP22079 712 aaPredicted RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 GABRR2P28476 465 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 SCNN1AP37088 669 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 PPP3CCP48454 512 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 HMGCS1Q01581 520 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 PFKPQ01813 784 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 SULT2A1Q06520 285 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 TRAF2Q12933 501 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 FAM45BPQ6NSW5 357 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 CHST15Q7LFX5 561 aaPredicted RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 CILP2Q8IUL8 1156 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 FAM47BQ8NA70 645 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 FAM45AQ8TCE6 357 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 EEF1AKMT1Q8WVE0 214 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 IRGQQ8WZA9 623 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 SNX19Q92543 992 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 TLR6Q9Y2C9 796 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 ACSL4O60488 711 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 SERPIND1P05546 499 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 CTGFP29279 349 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 HALP42357 657 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 MAGEA3P43357 314 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 RGRP47804 291 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 CLCQ05315 142 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 PNPT1Q8TCS8 783 aaKnown RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 ACTRT2Q8TDY3 377 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 FAM162AQ96A26 154 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 MED8Q96G25 268 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 ATG10Q9H0Y0 220 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 ALG2Q9H553 416 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 RHBDL2Q9NX52 303 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 PSMD13Q9UNM6 376 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 URODP06132 367 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 FAM58BPP0C7Q3 252 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 MZF1P28698 734 aaPredicted RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 PRDX3P30048 256 aaKnown RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 RANBP1P43487 201 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 YAP1P46937 504 aaKnown RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 MTPNP58546 118 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 LRRC23Q53EV4 343 aaPredicted RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
DDR1-226ENST00000376569 C11orf74Q86VG3 221 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 MFSD6LQ8IWD5 586 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 MYEOVQ96EZ4 313 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 TSSK3Q96PN8 268 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 ARMC7Q9H6L4 198 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 STK39Q9UEW8 545 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 LIMD1Q9UGP4 676 aa12.63□□□□□ -0.39
DDR1-226ENST00000376569 MTMR11A4FU01 709 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 SLC38A8A6NNN8 435 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 SDHDO14521 159 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 MUSKO15146 869 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 RPP40O75818 363 aaKnown RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 NDST3O95803 873 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 HIST1H2AGP0C0S8 130 aaPredicted RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 HIST1H2ADP20671 130 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 RGS4P49798 205 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 CHN2P52757 468 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 IRX1P78414 480 aaPredicted RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 GCNT7Q6ZNI0 430 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 ENDOVQ8N8Q3 282 aaKnown RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 MRPS31Q92665 395 aaKnown RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 HIST1H2AHQ96KK5 128 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 HIST1H2AJQ99878 128 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 H2AFJQ9BTM1 129 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 HIPK3Q9H422 1215 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 ZDHHC4Q9NPG8 344 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 ARL15Q9NXU5 204 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 POLR3HQ9Y535 204 aaPredicted RBP12.62□□□□□ -0.39
DDR1-226ENST00000376569 TRIM38O00635 465 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 BCL2L1Q07817 233 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 BFSP2Q13515 415 aa12.62□□□□□ -0.39
DDR1-226ENST00000376569 LRCH3Q96II8 777 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms