RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 PRAMEF1O95521 474 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 CYBAP13498 195 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 CKMT2P17540 419 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 FOLH1Q04609 750 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 TTLL9Q3SXZ7 439 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 SMYD5Q6GMV2 418 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 DNAJB7Q7Z6W7 309 aaPredicted RBP12.37□□□□□ -0.43
DDR1-224ENST00000376567 ANKRD46Q86W74 232 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 OSGEPL1Q9H4B0 414 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 OPTCQ9UBM4 332 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 GNG14A0A1W2PPG7 69 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
DDR1-224ENST00000376567 TMCC1O94876 653 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
DDR1-224ENST00000376567 HNF4AP41235 474 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 PDK3Q15120 406 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 UGT3A1Q6NUS8 523 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 PQLC1Q8N2U9 271 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 OR10Q1Q8NGQ4 319 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 UNC93B1Q9H1C4 597 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 SH3BP4Q9P0V3 963 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 CFAP99D6REC4 459 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 CLDN11O75508 207 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 EOMESO95936 686 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 PARP15Q460N3 678 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 KIAA0930Q6ICG6 404 aaPredicted RBP12.37□□□□□ -0.43
DDR1-224ENST00000376567 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 GCNT7Q6ZNI0 430 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 ASRGL1Q7L266 308 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 LYSMD3Q7Z3D4 306 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 TMEM173Q86WV6 379 aaPredicted RBP12.37□□□□□ -0.43
DDR1-224ENST00000376567 SYTL1Q8IYJ3 562 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 GPR156Q8NFN8 814 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 PNPT1Q8TCS8 783 aaKnown RBP12.37□□□□□ -0.43
DDR1-224ENST00000376567 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDR1-224ENST00000376567 VPS9D1Q9Y2B5 631 aa12.37□□□□□ -0.43
DDR1-224ENST00000376567 KCNA5P22460 613 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 SOAT1P35610 550 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 WASP42768 502 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 PHEXP78562 749 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 CDC16Q13042 620 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 TAZQ16635 292 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 IRGCQ6NXR0 463 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 AFTPHQ6ULP2 937 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 PRDM16Q9HAZ2 1276 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 ZFYVE1Q9HBF4 777 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 PAPOLBQ9NRJ5 636 aaKnown RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDR1-224ENST00000376567 MTF2Q9Y483 593 aaPredicted RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 POLR3HQ9Y535 204 aaPredicted RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 RAD51BO15315 384 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 GALTP07902 379 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 CSKP41240 450 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 ACTR3P61158 418 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 CLCQ05315 142 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 NEDD8Q15843 81 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 MSANTD2Q6P1R3 559 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 GPRIN3Q6ZVF9 776 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 SELENOMQ8WWX9 145 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 LRTOMTQ8WZ04 291 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 RTP4Q96DX8 246 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 SPAG4Q9NPE6 437 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 DNAJC28Q9NX36 388 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 KIF17Q9P2E2 1029 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 SORCS3Q9UPU3 1222 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 EIF3LQ9Y262 564 aaKnown RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 AP4B1Q9Y6B7 739 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 DNAH12Q6ZR08 3092 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 E7ENX8 843 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 ARVCFO00192 962 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 FKTNO75072 461 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 MTHFD1P11586 935 aaKnown RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 TTPAP49638 278 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 CASP9P55211 416 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 CDKN2DP55273 166 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 HMGCS1Q01581 520 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 IL10RBQ08334 325 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 ACOX1Q15067 660 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDR1-224ENST00000376567 BRSK1Q8TDC3 778 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 RTKNQ9BST9 563 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 KIFC1Q9BW19 673 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 MMADHCQ9H3L0 296 aaPredicted RBP12.36□□□□□ -0.43
DDR1-224ENST00000376567 PCDHGB4Q9UN71 923 aa12.36□□□□□ -0.43
DDR1-224ENST00000376567 PTGES3LE9PB15 166 aa12.35□□□□□ -0.43
DDR1-224ENST00000376567 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
DDR1-224ENST00000376567 IGSF6O95976 241 aa12.35□□□□□ -0.43
DDR1-224ENST00000376567 SERPINA4P29622 427 aa12.35□□□□□ -0.43
DDR1-224ENST00000376567 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
DDR1-224ENST00000376567 MSLNQ13421 630 aaPredicted RBP12.35□□□□□ -0.43
DDR1-224ENST00000376567 SAMD4BQ5PRF9 694 aaKnown RBP12.35□□□□□ -0.43
DDR1-224ENST00000376567 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
DDR1-224ENST00000376567 PTCD3Q96EY7 689 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms