RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 OTOP3Q7RTS5 596 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 ZNF570Q96NI8 536 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 COPS8Q99627 209 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 CAPN10Q9HC96 672 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 PDE10AQ9Y233 779 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 ARIH1Q9Y4X5 557 aaPredicted RBP21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 TLL2Q9Y6L7 1015 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 FAM159BA6NKW6 160 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 CLDN5O00501 218 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 MATN3O15232 486 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 NDST3O95803 873 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 TRMT10BQ6PF06 316 aaKnown RBP21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 BTN2A3PQ96KV6 586 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 STARD7Q9NQZ5 370 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 NKX1-2Q9UD57 310 aaPredicted RBP21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 PCDHAC2Q9Y5I4 1007 aa21.12■□□□□ 0.97
TGFBR1-202ENST00000374994 SMIM35A0A1B0GVV1 85 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 SLURP2P0DP57 97 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 ACOX1Q15067 660 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 PYDC2Q56P42 97 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 DSG4Q86SJ6 1040 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 TMEM126BQ8IUX1 230 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 PPTC7Q8NI37 304 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 PPM1MQ96MI6 270 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 CRISPLD1Q9H336 500 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 CCDC189A1A4V9 331 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 LOC110117498-PIK3R3F6TDL0 507 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 OLFML1Q6UWY5 402 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 C16orf59Q7L2K0 433 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 TUBGCP5Q96RT8 1024 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 TRIM8Q9BZR9 551 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 CACNA1FO60840 1977 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 KIR3DL1P43629 444 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 GPR158Q5T848 1215 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 CYP20A1Q6UW02 462 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 RTL3Q8N8U3 475 aaKnown RBP21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 PDZD7Q9H5P4 517 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 OXSMQ9NWU1 459 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 PEX16Q9Y5Y5 336 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 SETMARQ53H47 684 aaPredicted RBP21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 DAW1Q8N136 415 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 HEXDCQ8WVB3 486 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 OSGEPL1Q9H4B0 414 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 RPRD1BQ9NQG5 326 aaKnown RBP21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 XKR6Q5GH73 641 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 MBD2Q9UBB5 411 aa21.11■□□□□ 0.97
TGFBR1-202ENST00000374994 CAPN15O75808 1086 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 TSTD2Q5T7W7 516 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ZNF607Q96SK3 696 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 RBM47A0AV96 593 aaKnown RBP21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 VNN1O95497 513 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 SLC6A2P23975 617 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ZDHHC20Q5W0Z9 365 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 CCDC185Q8N715 623 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 DTLQ9NZJ0 730 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 SUCOQ9UBS9 1254 aaKnown RBP21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 RIMS1Q86UR5 1692 aaKnown RBP21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 UBXN8O00124 270 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 CAPN1P07384 714 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 MPP1Q00013 466 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 GALNT3Q14435 633 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 MED22Q15528 200 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ZSWIM7Q19AV6 140 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ALFQ53S48 1182 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 GTF2A1LQ9UNN4 478 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ZNF232Q9UNY5 417 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ITGAXP20702 1163 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 MAPK9P45984 424 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 PCDH12Q9NPG4 1184 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 TRMT13Q9NUP7 481 aaKnown RBP21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 ACLYP53396 1101 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 DLG1Q12959 904 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 CBX3Q13185 183 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 PTCHD4Q6ZW05 846 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 MOV10Q9HCE1 1003 aaKnown RBP21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 FZD10Q9ULW2 581 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 COQ6Q9Y2Z9 468 aa21.1■□□□□ 0.97
TGFBR1-202ENST00000374994 FAM149AA5PLN7 773 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 OR10H3O60404 316 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 FADS2O95864 444 aaKnown RBP21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 GLB1L3Q8NCI6 653 aaPredicted RBP21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 CLP1Q92989 425 aaKnown RBP21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 PTGFRNQ9P2B2 879 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 SLIT2O94813 1529 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 NPEPPSL1A6NEC2 478 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 OR6C75A6NL08 312 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 MPZL2O60487 215 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 FYNP06241 537 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 OGNP20774 298 aaKnown RBP21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 ASPAP45381 313 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 SMARCB1Q12824 385 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 TYSND1Q2T9J0 566 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 KCTD8Q6ZWB6 473 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 ASMTP46597 345 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 KCNJ11Q14654 390 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 TMPRSS4Q9NRS4 437 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 ZNF221Q9UK13 617 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 CLDN11O75508 207 aa21.09■□□□□ 0.97
TGFBR1-202ENST00000374994 CCNKO75909 580 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms