RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 GOT1P17174 413 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 APLP1P51693 650 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 GABARAPL2P60520 117 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 MRPS15P82914 257 aaKnown RBP20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 TNFAIP2Q03169 654 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 IFRD2Q12894 506 aaPredicted RBP20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 ATAD3CQ5T2N8 411 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 STK32CQ86UX6 486 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 MICALL2Q8IY33 904 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 PYROXD2Q8N2H3 581 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 CELF2-AS1Q8N7Q2 184 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 LRRC58Q96CX6 371 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 BFARQ9NZS9 450 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 RABL2BQ9UNT1 228 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 SATB2Q9UPW6 733 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 GSK3BP49841 420 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 CD47Q08722 323 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 CDK10Q15131 360 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 STXBP2Q15833 593 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 PSMD5Q16401 504 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 RABL3Q5HYI8 236 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 DCAF15Q66K64 600 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 CCBE1Q6UXH8 406 aaPredicted RBP20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 GATAD2AQ86YP4 633 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 OR6F1Q8NGZ6 308 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 CHAC2Q8WUX2 184 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 OSCP1Q8WVF1 389 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 C3orf30Q96M34 536 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 SNX18Q96RF0 628 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 PNMA8BQ9ULN7 279 aaPredicted RBP20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 USP22Q9UPT9 525 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 NDUFAF1Q9Y375 327 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 PCDHA9Q9Y5H5 950 aa20.52■□□□□ 0.88
TMEFF1-201ENST00000374879 BBIP1A8MTZ0 92 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 UPK1AO00322 258 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 MFSD11O43934 449 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 DNAJB5O75953 348 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 KCNA5P22460 613 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 CAPSQ13938 189 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 COLEC12Q5KU26 742 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 PID1Q7Z2X4 250 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 NATD1Q8N6N6 113 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 CCNYQ8ND76 341 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 DNAJB14Q8TBM8 379 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 BIRC7Q96CA5 298 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 TMEM246Q9BRR3 403 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 CLPBQ9H078 707 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 SMOC2Q9H3U7 446 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 GBA2Q9HCG7 927 aaPredicted RBP20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 FAM118AQ9NWS6 357 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 NUDT5Q9UKK9 219 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 MAU2Q9Y6X3 613 aa20.52■□□□□ 0.87
TMEFF1-201ENST00000374879 DOCK1Q14185 1865 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 TRIP11Q15643 1979 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 DPYSL4O14531 572 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ANGPT2O15123 496 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 SOAT2O75908 522 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 GTF2E2P29084 291 aaKnown RBP20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 HADHAP40939 763 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF181Q2M3W8 571 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF667Q5HYK9 610 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 RBM23Q86U06 439 aaKnown RBP20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 KHSRPQ92945 711 aaKnown RBP eCLIP20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 TMBIM1Q969X1 311 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 SLC10A4Q96EP9 437 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 CAMKK2Q96RR4 588 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ALG2Q9H553 416 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 EXD2Q9NVH0 621 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 HACD1B0YJ81 288 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 HOXC6P09630 235 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 TPH1P17752 444 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 PIGAP37287 484 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 NEK5Q6P3R8 708 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ELMOD2Q8IZ81 293 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 DEPDC4Q8N2C3 294 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 AFAP1L2Q8N4X5 818 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 IL17RDQ8NFM7 739 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF300Q96RE9 604 aaPredicted RBP20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 APOL2Q9BQE5 337 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 BCO2Q9BYV7 579 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ASPSCR1Q9BZE9 553 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 RHOJQ9H4E5 214 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 SPON1Q9HCB6 807 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 GIMAP2Q9UG22 337 aa20.51■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF487B1APH4 448 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 LRIG2O94898 1065 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 AHSGP02765 367 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 NMBRP28336 390 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 GRK3P35626 688 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 PLK1P53350 603 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 OSTNP61366 133 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 FUT11Q495W5 492 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 AGAP6Q5VW22 663 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 LYPD8Q6UX82 237 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 SCUBE3Q8IX30 993 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 SVOPQ8N4V2 548 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 C12orf42Q96LP6 360 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 AGAP4Q96P64 663 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 DEPDC7Q96QD5 511 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 NIFKQ9BYG3 293 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms